CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ecym_2615
(
Eremothecium cymbalariae
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
Ecym_2615
T185051_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGOS_AEL327W
M01004_2.00
Ashbya gossypii
NNVRCKCRNN
NNYGMGYBNN
PBM
Nakagawa et al.(2013)
AEL327Wp
0.817
0.951
KLLA0_F08206g
M01015_2.00
Kluyveromyces lactis
NNVRYKCRNN
NNYGMRYBNN
PBM
Nakagawa et al.(2013)
KLLA0F08206p
0.806
0.915
FHL1
M00046_2.00
Saccharomyces cerevisiae
NGACGCAM
KTGCGTCN
PBM
Badis et al.(2008)
FHL1_2086
0.697
0.890
FHL1
M01543_2.00
Saccharomyces cerevisiae
NVDCGCRNN
NNYGCGHBN
PBM
Zhu et al.(2009)
Fhl1
0.697
0.890
FHL1
M07475_2.00
Saccharomyces cerevisiae
GACGCAVN
NBTGCGTC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0295.1
0.697
0.890
FHL1
M08557_2.00
Saccharomyces cerevisiae
NNNDDNGACGCAMWNNNNDN
NHNNNNWKTGCGTCNHHNNN
Misc
DeBoer et al.(2011)
YPR104C_808
0.697
0.890
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET38328
Forkhead
644
730
KPTCSYSNLITTCLRKYSSSKGMSLSEIYASIRELFPYYKYCPDGWQSSVRHNLSLNKSFRKVSKEGKGWLWGLDEGYIAEREKQRK
Links
Other
Forkhead
family TFs
Other
Eremothecium cymbalariae
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
22632_Multiple
Saccharomyces mikatae
22632_Multiple
I
0.697
23064_YPR104C
Saccharomyces paradoxus
23064_YPR104C
I
0.697
25921_YPR104C
Saccharomyces bayanus
25921_YPR104C
I
0.696
AACERI_AaceriAEL327W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAEL327W
I
0.817
AGOS_AEL327W
Ashbya gossypii
AGOS_AEL327W
D
0.817
BN7_771
Wickerhamomyces ciferrii
BN7_771
I
0.832
CAGL0G01782g
Candida glabrata
CAGL0G01782g
I
0.679
HPODL_04343
Ogataea parapolymorpha
HPODL_04343
I
0.746
JL09_g4297
Pichia kudriavzevii
JL09_g4297
I
0.743
KAFR_0D04220
Kazachstania africana
KAFR_0D04220
I
0.688
KLLA0_F08206g
Kluyveromyces lactis
KLLA0_F08206g
D
0.806
KLTH0D03036g
Lachancea thermotolerans
KLTH0D03036g
I
0.809
KLTH0D03036g
Kluyveromyces thermotolerans
KLTH0D03036g
I
0.809
KNAG_0A07530
Kazachstania naganishii
KNAG_0A07530
I
0.688
Kpol_1018p143
Vanderwaltozyma polyspora
Kpol_1018p143
I
0.682
KUCA_T00003332001
Kuraishia capsulata
KUCA_T00003332001
I
0.765
Kwal_7268
Kluyveromyces waltii
Kwal_7268
I
0.809
LALA0_S08e07316g
Lachancea lanzarotensis
LALA0_S08e07316g
I
0.809
NCAS_0A11450
Naumovozyma castellii
NCAS_0A11450
I
0.700
NDAI_0A04850
Naumovozyma dairenensis
NDAI_0A04850
I
0.697
PAS_chr4_0980
Komagataella pastoris
PAS_chr4_0980
I
0.767
SAKL0B09284g
Lachancea kluyveri
SAKL0B09284g
I
0.810
Scas_Contig705.31
Saccharomyces castellii
Scas_Contig705.31
I
0.700
SKUD_169306
Saccharomyces kudriavzevii
SKUD_169306
I
0.673
TBLA_0C02390
Tetrapisispora blattae
TBLA_0C02390
I
0.676
TDEL_0C05550
Torulaspora delbrueckii
TDEL_0C05550
I
0.693
TPHA_0M01760
Tetrapisispora phaffii
TPHA_0M01760
I
0.771
XP_002494105.1
Pichia pastoris
XP_002494105.1
I
0.767
FHL1
Saccharomyces cerevisiae
YPR104C
D
0.697
ZBAI_00452
Zygosaccharomyces bailii
ZBAI_00452
I
0.707
ZBAI_05606
Zygosaccharomyces bailii
ZBAI_05606
I
0.707
ZYRO0C17710g
Zygosaccharomyces rouxii
ZYRO0C17710g
I
0.693