CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000012022
(
Gadus morhua
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSGMOG00000012022
T185954_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.845
0.919
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.806
0.895
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.806
0.884
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.786
0.733
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000012866
Forkhead
193
283
KPIYSYSCLIAMALKNSKTGSLPVSEIYSFMKDHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKLSGSSRKGCLWALNPAKIDKMEEEMQ
Links
Other
Forkhead
family TFs
Other
Gadus morhua
TFs
198 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29661.m000923
Ricinus communis
29661.m000923
N
0.000
Aquca_060_00005
Aquilegia coerulea
Aquca_060_00005
N
0.000
cassava32963.m1
Manihot esculenta
cassava32963.m1
N
0.000
cassava7505.valid.m1
Manihot esculenta
cassava7505.valid.m1
N
0.000
Ca_02226
Cicer arietinum
Ca_02226
N
0.000
Ca_09352
Cicer arietinum
Ca_09352
N
0.000
chr2.CM0168.260.nc
Lotus japonicus
chr2.CM0168.260.nc
N
0.000
Ciclev10025470m.g
Citrus clementina
Ciclev10025470m.g
N
0.000
Cla014238
Citrullus lanatus
Cla014238
N
0.000
Cucsa.103160
Cucumis sativus
Cucsa.103160
N
0.000
Eucgr.I00704
Eucalyptus grandis
Eucgr.I00704
N
0.000
evm.TU.supercontig_6.17
Carica papaya
evm.TU.supercontig_6.17
N
0.000
gene05757-v1.0-hybrid
Fragaria vesca
gene05757-v1.0-hybrid
N
0.000
GLYMA01G40180
Glycine max
GLYMA01G40180
N
0.000
GLYMA05G22460
Glycine max
GLYMA05G22460
N
0.000
GLYMA11G05110
Glycine max
GLYMA11G05110
N
0.000
GLYMA17G17400
Glycine max
GLYMA17G17400
N
0.000
Gorai.007G223500
Gossypium raimondii
Gorai.007G223500
N
0.000
Gorai.008G083500
Gossypium raimondii
Gorai.008G083500
N
0.000
MDP0000165587
Malus domestica
MDP0000165587
N
0.000
MDP0000171602
Malus domestica
MDP0000171602
N
0.000
MDP0000687763
Malus domestica
MDP0000687763
N
0.000
MDP0000822651
Malus domestica
MDP0000822651
N
0.000
MDP0000840369
Malus domestica
MDP0000840369
N
0.000
MTR_4g097080
Medicago truncatula
MTR_4g097080
N
0.000
MTR_5g015490
Medicago truncatula
MTR_5g015490
N
0.000
orange1.1g035867m.g
Citrus sinensis
orange1.1g035867m.g
N
0.000
PGSC0003DMG400021444
Solanum tuberosum
PGSC0003DMG400021444
N
0.000
PK04147.1
Cannabis sativa
PK04147.1
N
0.000
Pm002381
Prunus mume
Pm002381
N
0.000
SHR
Populus trichocarpa
POPTR_0012s06430
N
0.000
PRUPE_ppa004454mg
Prunus persica
PRUPE_ppa004454mg
N
0.000
SapurV1A.0461s0030
Salix purpurea
SapurV1A.0461s0030
N
0.000
Solyc02g092370.1
Solanum lycopersicum
Solyc02g092370.1
N
0.000
TCM_000801
Theobroma cacao
TCM_000801
N
0.000
SHR
Vitis vinifera
VIT_07s0129g00030
N
0.000