CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
FOXQ1
(
Loxodonta africana
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSLAFG00000000082
T186035_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXQ1
M04823_2.00
Homo sapiens
YWRHRTAAACWD
HWGTTTAYDYWR
SELEX
Yin et al.(2017)
FOXQ1_eDBD_HT-SELEX
0.828
0.988
FOXQ1
M09093_2.00
Homo sapiens
RMATAAACAAYD
HRTTGTTTATKY
Misc
Kulakovskiy et al.(2013)
FOXQ1_HUMAN.H11MO.0.C
0.828
0.988
Foxq1
M09105_2.00
Mus musculus
RMATAAACAAYD
HRTTGTTTATKY
Misc
Kulakovskiy et al.(2013)
FOXQ1_MOUSE.H11MO.0.C
0.828
0.988
FOXQ1_RAT
M10572_2.00
Rattus norvegicus
AWATAAACAWTN
NAWTGTTTAKWT
Transfac
Matys et al.(2006)
V$HFH1_01
0.828
0.988
FOXQ1
M04824_2.00
Homo sapiens
YWAYRTAAACWD
HWGTTTAYRTWR
SELEX
Yin et al.(2017)
FOXQ1_eDBD_Methyl-HT-SELEX
0.828
0.988
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000023710
Forkhead
91
180
KPPYSYIALIAMAIRDSAGGRLTLKINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADGVF
Links
Other
Forkhead
family TFs
Other
Loxodonta africana
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_54060
Hordeum vulgare
MLOC_54060
N
Traes_5BS_580CC3E5F
Triticum aestivum
Traes_5BS_580CC3E5F
N
TRIUR3_14606
Triticum urartu
TRIUR3_14606
N