CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOXN1
(
Oryctolagus cuniculus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSOCUG00000013779
T186499_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.849
1.000
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.849
0.988
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.798
0.895
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.734
0.698
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000011856
Forkhead
272
362
KPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGSSSRKGCLWALNPAKIDKMQEELQ
Links
Other
Forkhead
family TFs
Other
Oryctolagus cuniculus
TFs
191 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA002940
Oryza indica
BGIOSGA002940
N
0.000
BGIOSGA002943
Oryza indica
BGIOSGA002943
N
0.000
BGIOSGA003814
Oryza indica
BGIOSGA003814
N
0.000
BRADI2G41670
Brachypodium distachyon
BRADI2G41670
N
0.000
GRMZM2G333582
Zea mays
GRMZM2G333582
N
0.000
GRMZM2G397755
Zea mays
GRMZM2G397755
N
0.000
GRMZM2G463133
Zea mays
GRMZM2G463133
N
0.000
GRMZM5G849600
Zea mays
GRMZM5G849600
N
0.000
LPERR01G05820
Leersia perrieri
LPERR01G05820
N
0.000
LPERR01G17450
Leersia perrieri
LPERR01G17450
N
0.000
MLOC_70258
Hordeum vulgare
MLOC_70258
N
0.000
OB01G16120
Oryza brachyantha
OB01G16120
N
0.000
OB01G30040
Oryza brachyantha
OB01G30040
N
0.000
OBART01G06120
Oryza barthii
OBART01G06120
N
0.000
OBART01G06170
Oryza barthii
OBART01G06170
N
0.000
OBART01G20310
Oryza barthii
OBART01G20310
N
0.000
OGLUM01G06690
Oryza glumaepatula
OGLUM01G06690
N
0.000
OGLUM01G06730
Oryza glumaepatula
OGLUM01G06730
N
0.000
OGLUM01G23890
Oryza glumaepatula
OGLUM01G23890
N
0.000
OLONG_006433
Oryza longistaminata
OLONG_006433
N
0.000
OMERI01G06310
Oryza meridionalis
OMERI01G06310
N
0.000
OMERI01G18730
Oryza meridionalis
OMERI01G18730
N
0.000
ONIVA01G07080
Oryza nivara
ONIVA01G07080
N
0.000
ONIVA01G07190
Oryza nivara
ONIVA01G07190
N
0.000
ONIVA01G22870
Oryza nivara
ONIVA01G22870
N
0.000
OPUNC01G20610
Oryza punctata
OPUNC01G20610
N
0.000
ORGLA01G0058200
Oryza glaberrima
ORGLA01G0058200
N
0.000
ORGLA01G0397100
Oryza glaberrima
ORGLA01G0397100
N
0.000
ORGLA08G0199700
Oryza glaberrima
ORGLA08G0199700
N
0.000
ORUFI01G06710
Oryza rufipogon
ORUFI01G06710
N
0.000
ORUFI01G22920
Oryza rufipogon
ORUFI01G22920
N
0.000
OS01G0195801
Oryza sativa
OS01G0195801
N
0.000
OS01G0196300
Oryza sativa
OS01G0196300
N
0.000
OS01G0575200
Oryza sativa
OS01G0575200
N
0.000
Pavir.Ea00369
Panicum virgatum
Pavir.Ea00369
N
0.000
Pavir.Ea01566
Panicum virgatum
Pavir.Ea01566
N
0.000
Pavir.Eb01823
Panicum virgatum
Pavir.Eb01823
N
0.000
Sb03g002910
Sorghum bicolor
Sb03g002910
N
0.000
Sb03g025860
Sorghum bicolor
Sb03g025860
N
0.000
Si001328m.g
Setaria italica
Si001328m.g
N
0.000
TRAES3BF047700010CFD_g
Triticum aestivum
TRAES3BF047700010CFD_g
N
0.000