CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KUCA_T00003332001
(
Kuraishia capsulata
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
KUCA_T00003332001
T187887_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLLA0_F08206g
M01015_2.00
Kluyveromyces lactis
NNVRYKCRNN
NNYGMRYBNN
PBM
Nakagawa et al.(2013)
KLLA0F08206p
0.830
0.841
AGOS_AEL327W
M01004_2.00
Ashbya gossypii
NNVRCKCRNN
NNYGMGYBNN
PBM
Nakagawa et al.(2013)
AEL327Wp
0.768
0.817
FHL1
M00046_2.00
Saccharomyces cerevisiae
NGACGCAM
KTGCGTCN
PBM
Badis et al.(2008)
FHL1_2086
0.698
0.768
FHL1
M01543_2.00
Saccharomyces cerevisiae
NVDCGCRNN
NNYGCGHBN
PBM
Zhu et al.(2009)
Fhl1
0.698
0.768
FHL1
M07475_2.00
Saccharomyces cerevisiae
GACGCAVN
NBTGCGTC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0295.1
0.698
0.768
FHL1
M08557_2.00
Saccharomyces cerevisiae
NNNDDNGACGCAMWNNNNDN
NHNNNNWKTGCGTCNHHNNN
Misc
DeBoer et al.(2011)
YPR104C_808
0.698
0.768
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CDK27354
Forkhead
331
417
KPACSYSTLIESCLRARGTEKGMSLSEIYRGIQDLYPYYKYCSDGWQSSVRHNLSLNKSFKKVSKEGKGWLWGLDEEYCAERDKVKT
Links
Other
Forkhead
family TFs
Other
Kuraishia capsulata
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action