CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
augustus_masked-nMf.1.1.scaf24077-processed-gene-0.0
(
Meloidogyne floridensis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
augustus_masked-nMf.1.1.scaf24077-processed-gene-0.0
T190339_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG14292
M01226_2.00
Caenorhabditis briggsae
VAWAACAW
WTGTTWTB
PBM
Lambert et al.(2019)
pTH11445
0.796
0.791
fkh-9
M00663_2.00
Caenorhabditis elegans
NNVWHAAYAN
NTRTTDWBNN
PBM
Narasimhan et al.(2015)
pTH9957
0.796
0.791
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf24077-processed-gene-0.0-mRNA-1
Forkhead
15
107
RPSLSYKDLIIEAIESNPDRRLKLSEIYQVIKYLHPYYQRRADQWGWQNSIRHNLSLHDCFVKLPLKQTSANGVVGHFWTVVHRNPEDKQGPT
Links
Other
Forkhead
family TFs
Other
Meloidogyne floridensis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
JAAARDRAFT_31242
Jaapia argillacea
JAAARDRAFT_31242
N
PHLGIDRAFT_281883
Phlebiopsis gigantea
PHLGIDRAFT_281883
N