Bra017766 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra017766 T191961_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra017766.1-P GATA 82 117

Links

Other GATA family TFs
Other Brassica rapa TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_00105 Beauveria bassiana BBA_00105 N
AFUA_4G11850 Aspergillus fumigatus CADAFUAG00008171 N
NFIA_104380 Neosartorya fischeri CADNFIAG00009977 N
CORT_0C04810 Candida orthopsilosis CORT_0C04810 N
CPAG_05114 Candida parapsilosis CPAG_05114 N
CTRG_02521 Candida tropicalis CTRG_02521 N
EURHEDRAFT_480926 Aspergillus ruber EURHEDRAFT_480926 I
FFUJ_07470 Fusarium fujikuroi FFUJ_07470 I
FGRRES_10069 Fusarium graminearum FGRRES_10069 I
FPSE_00487 Fusarium pseudograminearum FPSE_00487 I
FVEG_02704 Fusarium verticillioides FVEG_02704 I
G210_4588 Candida maltosa G210_4588 N
KUCA_T00002773001 Kuraishia capsulata KUCA_T00002773001 I
MAJ_08454 Metarhizium majus MAJ_08454 N
MANI_010211 Metarhizium anisopliae MANI_010211 N
MBR_09134 Metarhizium brunneum MBR_09134 N
MGG_13350 Magnaporthe oryzae MGG_13350 N
MGU_09793 Metarhizium guizhouense MGU_09793 N
Pc21g08380 Penicillium chrysogenum Pc21g08380 I
PCH_Pc21g08380 Penicillium rubens PCH_Pc21g08380 I
PV06_10546 Exophiala oligosperma PV06_10546 I
PV10_04640 Exophiala mesophila PV10_04640 N
TRIVIDRAFT_114462 Trichoderma virens TRIVIDRAFT_114462 I
VHEMI02171 Torrubiella hemipterigena VHEMI02171 I
X797_002926 Metarhizium robertsii X797_002926 N
Z517_01120 Fonsecaea pedrosoi Z517_01120 N