PGSC0003DMG400033576 (Solanum tuberosum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 PGSC0003DMG400033576 T194725_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400083773 GATA 246 283
PGSC0003DMT400083774 GATA 246 282

Links

Other GATA family TFs
Other Solanum tuberosum TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29596.m000720 Ricinus communis 29596.m000720 N 0.810
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.848
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.815
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.815
Ca_14968 Cicer arietinum Ca_14968 N 0.815
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.810
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.842
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.810
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.815
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.810
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.810
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.815
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.815
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.842
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.842
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.842
GSMUA_Achr10G07970_001 Musa acuminata GSMUA_Achr10G07970_001 N 0.816
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.809
MDP0000303048 Malus domestica MDP0000303048 N 0.815
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.810
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.842
PDK_20s1363101g001 Phoenix dactylifera PDK_20s1363101g001 N 0.816
PK04210.1 Cannabis sativa PK04210.1 N 0.810
Pm004390 Prunus mume Pm004390 N 0.815
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.806
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.806
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.815
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.806
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.806
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.867
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.848
TCM_034530 Theobroma cacao TCM_034530 N 0.842
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.862
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.810