POPTR_0005s19580 (Populus trichocarpa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 POPTR_0005s19580 T194886_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s19580.1 GATA 37 74
POPTR_0005s19580.2 GATA 37 74

Links

Other GATA family TFs
Other Populus trichocarpa TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29596.m000720 Ricinus communis 29596.m000720 N 0.862
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.810
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.857
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.856
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.862
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.831
Cla022486 Citrullus lanatus Cla022486 N 0.827
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.827
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.862
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.857
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.862
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.862
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.843
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.857
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.857
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.831
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.831
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.831
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.834
MDP0000303048 Malus domestica MDP0000303048 N 0.857
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.862
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.831
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.806
PK04210.1 Cannabis sativa PK04210.1 N 0.862
Pm004390 Prunus mume Pm004390 N 0.857
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.867
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.857
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.867
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.867
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.806
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.810
TCM_034530 Theobroma cacao TCM_034530 N 0.831
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.810
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.851