RTG_02478 (Rhodotorula glutinis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 RTG_02478 T195062_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GZF3
M00051_2.00 		Saccharomyces cerevisiae
HGATAAGN
NCTTATCD		 PBM
Badis et al.(2008)
GZF3_2167 		0.838 0.657
GZF3
M01548_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gzf3 		0.838 0.657
DAL80
M00052_2.00 		Saccharomyces cerevisiae
NNNNTANNNN
NNNNTANNNN		 PBM
Badis et al.(2008)
DAL80_2083 		0.838 0.657
GZF3
M07480_2.00 		Saccharomyces cerevisiae
HGATAASN
NSTTATCD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0309.1 		0.838 0.657
DAL80
M07481_2.00 		Saccharomyces cerevisiae
YGATAAG
CTTATCR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0289.1 		0.838 0.657
GZF3
M08562_2.00 		Saccharomyces cerevisiae
GATAAG
CTTATC		 Misc
DeBoer et al.(2011)
YJL110C_593 		0.838 0.657
DAL80
M08564_2.00 		Saccharomyces cerevisiae
VNMGATAD
HTATCKNB		 Misc
DeBoer et al.(2011)
YKR034W_1355 		0.838 0.657
GAT1
M00049_2.00 		Saccharomyces cerevisiae
NNNNGATANN
NNTATCNNNN		 PBM
Badis et al.(2008)
GAT1_2166 		0.823 0.686
GAT1
M01546_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gat1 		0.823 0.686
GAT1
M07478_2.00 		Saccharomyces cerevisiae
NHGATAAG
CTTATCDN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0300.1 		0.823 0.686
GAT1
M08560_2.00 		Saccharomyces cerevisiae
WKTGATWW
WWATCAMW		 Misc
DeBoer et al.(2011)
YFL021W_962 		0.823 0.686
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGU11676 GATA 3734 3768

Links

Other GATA family TFs
Other Rhodotorula glutinis TFs

376 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACHR008952 Anopheles christyi ACHR008952 I 0.000
AEPI008594 Anopheles epiroticus AEPI008594 I 0.000
Alligator_sinensis_CCG011289.1 Alligator sinensis Alligator_sinensis_CCG011289.1 I 0.000
CPIJ013490 Culex quinquefasciatus CPIJ013490 I 0.000
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I 0.000
D917_06432 Trichinella nativa D917_06432 I 0.000
ECANG7_01760 Echinococcus canadensis ECANG7_01760 I 0.000
TEAD3 Canis familiaris ENSCAFG00000001326 I 0.000
ENSCING00000019408 Ciona intestinalis ENSCING00000019408 I 0.000
ENSCSAVG00000007634 Ciona savignyi ENSCSAVG00000007634 I 0.000
tead1a Danio rerio ENSDARG00000028159 I 0.000
tead1b Danio rerio ENSDARG00000059483 I 0.000
TEAD3 Equus caballus ENSECAG00000015056 I 0.000
TEAD3 Homo sapiens ENSG00000007866 D 0.000
TEAD4 Homo sapiens ENSG00000197905 D 0.000
TEAD4 Gasterosteus aculeatus ENSGACG00000003761 N 0.000
ENSGALG00000000953 Gallus gallus ENSGALG00000000953 I 0.000
ENSGMOG00000004752 Gadus morhua ENSGMOG00000004752 N 0.000
ENSGMOG00000015271 Gadus morhua ENSGMOG00000015271 I 0.000
TEAD3 Loxodonta africana ENSLAFG00000014818 I 0.000
TEAD1 Meleagris gallopavo ENSMGAG00000005493 I 0.000
TEAD4 Meleagris gallopavo ENSMGAG00000013910 I 0.000
TEAD3 Microcebus murinus ENSMICG00000000029 I 0.000
Tead4 Mus musculus ENSMUSG00000030353 D 0.000
ENSOARG00000012126 Ovis aries ENSOARG00000012126 I 0.000
TEAD3 Otolemur garnettii ENSOGAG00000002943 I 0.000
TEAD4 Oryzias latipes ENSORLG00000002553 I 0.000
ENSPFOG00000003170 Poecilia formosa ENSPFOG00000003170 I 0.000
TEAD4 Tetraodon nigroviridis ENSTNIG00000003414 N 0.000
tead1a Takifugu rubripes ENSTRUG00000005940 I 0.000
TEAD4 Takifugu rubripes ENSTRUG00000016489 I 0.000
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I 0.000
MDOA005382 Musca domestica MDOA005382 I 0.000
Myotis_brandtii_TEAD3_10017764 Myotis brandtii Myotis_brandtii_TEAD3_10017764 I 0.000
PPAI001408 Phlebotomus papatasi PPAI001408 I 0.000