Ca_02542 (Cicer arietinum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Ca_02542 T195840_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.842 0.886
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.838 0.886
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.838 0.886
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.837 0.857
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.800
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.832 0.800
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.832 0.800
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.832 0.800
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.832 0.800
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.832 0.800
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.800
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.800
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.832 0.800
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.832 0.771
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.832 0.771
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.771
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.771
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.771
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_02542 GATA 235 269

Links

Other GATA family TFs
Other Cicer arietinum TFs

608 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G12950 Brachypodium distachyon BRADI2G12950 N 0.000
F775_01832 Aegilops tauschii F775_01832 N 0.000
GRMZM2G010085 Zea mays GRMZM2G010085 N 0.000
LPERR01G13970 Leersia perrieri LPERR01G13970 N 0.000
mgf011812m Mimulus guttatus mgf011812m N 0.000
MLOC_10329 Hordeum vulgare MLOC_10329 N 0.000
OB01G25270 Oryza brachyantha OB01G25270 N 0.000
OBART01G15490 Oryza barthii OBART01G15490 N 0.000
OGLUM01G17850 Oryza glumaepatula OGLUM01G17850 N 0.000
OLONG_013778 Oryza longistaminata OLONG_013778 N 0.000
OMERI01G14330 Oryza meridionalis OMERI01G14330 N 0.000
OPUNC01G16280 Oryza punctata OPUNC01G16280 N 0.000
ORGLA01G0126700 Oryza glaberrima ORGLA01G0126700 N 0.000
ORUFI01G17280 Oryza rufipogon ORUFI01G17280 N 0.000
OS01G0367900 Oryza sativa OS01G0367900 N 0.000
Pavir.Ea01374 Panicum virgatum Pavir.Ea01374 N 0.000
Pavir.Eb01430 Panicum virgatum Pavir.Eb01430 N 0.000
Pavir.J08354 Panicum virgatum Pavir.J08354 N 0.000
Pavir.J38656 Panicum virgatum Pavir.J38656 N 0.000
PGSC0003DMG400030785 Solanum tuberosum PGSC0003DMG400030785 N 0.000
Sb03g014780 Sorghum bicolor Sb03g014780 N 0.000
SELMODRAFT_162307 Selaginella moellendorffii SELMODRAFT_162307 N 0.000
Si000122m.g Setaria italica Si000122m.g N 0.000
Solyc06g054560.2 Solanum lycopersicum Solyc06g054560.2 N 0.000
Traes_1BS_3B0E04EC6 Triticum aestivum Traes_1BS_3B0E04EC6 N 0.000
Traes_1DS_0761D66A3 Triticum aestivum Traes_1DS_0761D66A3 N 0.000
TRIUR3_20056 Triticum urartu TRIUR3_20056 N 0.000