cassava249.valid.m1 (Manihot esculenta)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 cassava249.valid.m1 T196022_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava249.valid.m1 GATA 206 241

Links

Other GATA family TFs
Other Manihot esculenta TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29596.m000720 Ricinus communis 29596.m000720 N 0.861
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.809
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.865
Ca_14968 Cicer arietinum Ca_14968 N 0.865
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.861
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.840
Cla022486 Citrullus lanatus Cla022486 N 0.835
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.835
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.861
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.865
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.861
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.861
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.851
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.865
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.865
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.839
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.839
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.839
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.834
MDP0000303048 Malus domestica MDP0000303048 N 0.865
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.861
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.840
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.815
PK04210.1 Cannabis sativa PK04210.1 N 0.861
Pm004390 Prunus mume Pm004390 N 0.865
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.856
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.856
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.865
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.856
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.856
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.814
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.809
TCM_034530 Theobroma cacao TCM_034530 N 0.839
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.809
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.850