cassava38292.valid.m1 (Manihot esculenta)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 cassava38292.valid.m1 T196034_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.857 0.833
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.857 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.853 0.889
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.853 0.889
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.847 0.806
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.847 0.806
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.847 0.806
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.847 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.839 0.889
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.837 0.833
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.833 0.778
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.832 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.778
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.778
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.722
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.722
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava38292.valid.m1 GATA 257 292

Links

Other GATA family TFs
Other Manihot esculenta TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R008171 Calypte anna Aan_R008171 I 0.000
Afo_R004362 Aptenodytes forsteri Afo_R004362 I 0.000
Alligator_sinensis_CCG005573.1 Alligator sinensis Alligator_sinensis_CCG005573.1 I 0.000
BAC58028 Xenopus laevis BAC58028 I 0.000
Brh_R010009 Buceros rhinoceros Brh_R010009 I 0.000
Cmyd_10006569 Chelonia mydas Cmyd_10006569 N 0.000
Cmyd_10008669 Chelonia mydas Cmyd_10008669 I 0.000
CXXC5 Anolis carolinensis ENSACAG00000002186 I 0.000
ENSAMEG00000011282 Ailuropoda melanoleuca ENSAMEG00000011282 I 0.000
ENSAMXG00000005579 Astyanax mexicanus ENSAMXG00000005579 I 0.000
ENSAMXG00000025596 Astyanax mexicanus ENSAMXG00000025596 I 0.000
ENSAPLG00000014751 Anas platyrhynchos ENSAPLG00000014751 I 0.000
ENSBTAG00000001751 Bos taurus ENSBTAG00000001751 I 0.000
TET3 Canis familiaris ENSCAFG00000008728 I 0.000
ENSCAFG00000031237 Canis familiaris ENSCAFG00000031237 I 0.000
ENSCJAG00000015701 Callithrix jacchus ENSCJAG00000015701 I 0.000
ENSCSAG00000004010 Chlorocebus sabaeus ENSCSAG00000004010 I 0.000
ENSCSAG00000015514 Chlorocebus sabaeus ENSCSAG00000015514 I 0.000
cxxc4 Danio rerio ENSDARG00000077817 I 0.000
cxxc5a Danio rerio ENSDARG00000078865 I 0.000
TET3 Dasypus novemcinctus ENSDNOG00000047130 I 0.000
ENSDORG00000003728 Dipodomys ordii ENSDORG00000003728 I 0.000
ENSETEG00000009591 Echinops telfairi ENSETEG00000009591 I 0.000
ENSFALG00000009467 Ficedula albicollis ENSFALG00000009467 I 0.000
CXXC4 Homo sapiens ENSG00000168772 I 0.000
TET3 Homo sapiens ENSG00000187605 I 0.000
ENSGACG00000017555 Gasterosteus aculeatus ENSGACG00000017555 I 0.000
cxxc5a Gasterosteus aculeatus ENSGACG00000020657 I 0.000
CXXC5 Gallus gallus ENSGALG00000000884 I 0.000
ENSGGOG00000028495 Gorilla gorilla ENSGGOG00000028495 I 0.000
ENSGMOG00000019280 Gadus morhua ENSGMOG00000019280 I 0.000
ENSGMOG00000019812 Gadus morhua ENSGMOG00000019812 I 0.000
ENSLACG00000003110 Latimeria chalumnae ENSLACG00000003110 I 0.000
ENSLACG00000011147 Latimeria chalumnae ENSLACG00000011147 I 0.000
ENSLAFG00000030012 Loxodonta africana ENSLAFG00000030012 I 0.000
ENSLOCG00000012594 Lepisosteus oculatus ENSLOCG00000012594 I 0.000
ENSLOCG00000012610 Lepisosteus oculatus ENSLOCG00000012610 I 0.000
ENSMEUG00000015364 Macropus eugenii ENSMEUG00000015364 I 0.000
CXXC5 Meleagris gallopavo ENSMGAG00000003042 I 0.000
CXXC5 Myotis lucifugus ENSMLUG00000003056 I 0.000
ENSMLUG00000003691 Myotis lucifugus ENSMLUG00000003691 I 0.000
CXXC4 Macaca mulatta ENSMMUG00000011660 I 0.000
CXXC5 Monodelphis domestica ENSMODG00000011772 I 0.000
ENSMODG00000020651 Monodelphis domestica ENSMODG00000020651 I 0.000
ENSMPUG00000007806 Mustela putorius furo ENSMPUG00000007806 I 0.000
ENSMPUG00000009175 Mustela putorius furo ENSMPUG00000009175 I 0.000
Tet3 Mus musculus ENSMUSG00000034832 I 0.000
Cxxc4 Mus musculus ENSMUSG00000044365 I 0.000
ENSNLEG00000000317 Nomascus leucogenys ENSNLEG00000000317 I 0.000
ENSNLEG00000013306 Nomascus leucogenys ENSNLEG00000013306 I 0.000
ENSOANG00000008235 Ornithorhynchus anatinus ENSOANG00000008235 I 0.000
ENSOANG00000009530 Ornithorhynchus anatinus ENSOANG00000009530 I 0.000
ENSOARG00000010827 Ovis aries ENSOARG00000010827 I 0.000
ENSOARG00000012255 Ovis aries ENSOARG00000012255 I 0.000
ENSOCUG00000015536 Oryctolagus cuniculus ENSOCUG00000015536 I 0.000
TET3 Oryctolagus cuniculus ENSOCUG00000016640 I 0.000
ENSOGAG00000026362 Otolemur garnettii ENSOGAG00000026362 I 0.000
ENSONIG00000005000 Oreochromis niloticus ENSONIG00000005000 I 0.000
ENSONIG00000017539 Oreochromis niloticus ENSONIG00000017539 I 0.000
cxxc5a Oryzias latipes ENSORLG00000006108 I 0.000
ENSORLG00000006474 Oryzias latipes ENSORLG00000006474 I 0.000
ENSP00000378248 Macaca fascicularis ENSP00000378248 I 0.000
ENSP00000378248-D1 Bos grunniens ENSP00000378248-D1 I 0.000
ENSPANG00000024069 Papio anubis ENSPANG00000024069 I 0.000
ENSPCAG00000002905 Procavia capensis ENSPCAG00000002905 I 0.000
ENSPFOG00000003666 Poecilia formosa ENSPFOG00000003666 I 0.000
ENSPFOG00000012064 Poecilia formosa ENSPFOG00000012064 I 0.000
ENSPFOG00000012083 Poecilia formosa ENSPFOG00000012083 I 0.000
ENSPFOG00000018974 Poecilia formosa ENSPFOG00000018974 I 0.000
ENSPPYG00000012286 Pongo abelii ENSPPYG00000012286 I 0.000
ENSPPYG00000014973 Pongo abelii ENSPPYG00000014973 I 0.000
ENSPSIG00000010569 Pelodiscus sinensis ENSPSIG00000010569 I 0.000
ENSPSIG00000013782 Pelodiscus sinensis ENSPSIG00000013782 I 0.000
ENSPTRG00000016332 Pan troglodytes ENSPTRG00000016332 I 0.000
CXXC4 Pteropus vampyrus ENSPVAG00000001501 I 0.000
Cxxc4 Rattus norvegicus ENSRNOG00000045764 I 0.000
ENSSARG00000013794 Sorex araneus ENSSARG00000013794 I 0.000
ENSSHAG00000002308 Sarcophilus harrisii ENSSHAG00000002308 I 0.000
ENSSHAG00000012293 Sarcophilus harrisii ENSSHAG00000012293 I 0.000
TET3 Sus scrofa ENSSSCG00000008292 I 0.000
ENSSSCG00000009159 Sus scrofa ENSSSCG00000009159 I 0.000
CXXC4 Sus scrofa ENSSSCG00000025621 I 0.000
ENSSTOG00000020058 Ictidomys tridecemlineatus ENSSTOG00000020058 I 0.000
CXXC5 Taeniopygia guttata ENSTGUG00000001608 I 0.000
ENSTGUG00000003779 Taeniopygia guttata ENSTGUG00000003779 I 0.000
ENSTNIG00000018036 Tetraodon nigroviridis ENSTNIG00000018036 I 0.000
cxxc4 Takifugu rubripes ENSTRUG00000004403 I 0.000
cxxc5a Takifugu rubripes ENSTRUG00000017014 I 0.000
ENSTRUG00000017756 Takifugu rubripes ENSTRUG00000017756 I 0.000
CXXC4 Tursiops truncatus ENSTTRG00000011432 I 0.000
ENSVPAG00000010751 Vicugna pacos ENSVPAG00000010751 I 0.000
ENSXMAG00000005442 Xiphophorus maculatus ENSXMAG00000005442 I 0.000
ENSXMAG00000011127 Xiphophorus maculatus ENSXMAG00000011127 I 0.000
Gfo_R011184 Geospiza fortis Gfo_R011184 I 0.000
Myotis_brandtii_cxxc4_10005165 Myotis brandtii Myotis_brandtii_cxxc4_10005165 I 0.000
Myotis_brandtii_Cxxc4_10030627 Myotis brandtii Myotis_brandtii_Cxxc4_10030627 I 0.000
Myotis_brandtii_CXXC5_10027816 Myotis brandtii Myotis_brandtii_CXXC5_10027816 I 0.000
Ogr01870 Ophisaurus gracilis Ogr01870 N 0.000
Ogr13317 Ophisaurus gracilis Ogr13317 I 0.000
Pvit_06919 Pogona vitticeps Pvit_06919 I 0.000
Pvit_12827 Pogona vitticeps Pvit_12827 I 0.000
cxxc4 Xenopus tropicalis XB-GENE-479477 I 0.000