Pavir.J38243 (Panicum virgatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Pavir.J38243 T196777_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J38243.1.p GATA 203 240
Pavir.J38243.2.p GATA 203 239
Pavir.J38243.3.p GATA 203 239
Pavir.J38243.4.p GATA 203 240
Pavir.J38243.5.p GATA 203 240
Pavir.J38243.6.p GATA 203 240

Links

Other GATA family TFs
Other Panicum virgatum TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002423 Aedes aegypti AAEL002423 I
AALB002515 Anopheles albimanus AALB002515 I
Aan_R004859 Calypte anna Aan_R004859 I
AARA005336 Anopheles arabiensis AARA005336 I
AATE010223 Anopheles atroparvus AATE010223 I
ACEP24088 Atta cephalotes ACEP24088 I
ACHR001840 Anopheles christyi ACHR001840 I
ACOM029750 Anopheles coluzzii ACOM029750 I
ACUA000831 Anopheles culicifacies ACUA000831 I
ACYPI009244 Acyrthosiphon pisum ACYPI009244 I
ADIR005442 Anopheles dirus ADIR005442 I
AEPI007770 Anopheles epiroticus AEPI007770 I
AFAF019328 Anopheles farauti AFAF019328 I
AFUN005909 Anopheles funestus AFUN005909 I
AGAP004386 Anopheles gambiae AGAP004386 I
Alligator_sinensis_CCG007905.1 Alligator sinensis Alligator_sinensis_CCG007905.1 I
AMAM001941 Anopheles maculatus AMAM001941 I
AMEC002742 Anopheles melas AMEC002742 I
AMEM001490 Anopheles merus AMEM001490 I
AMIN004773 Anopheles minimus AMIN004773 I
AQUA008454 Anopheles quadriannulatus AQUA008454 I
ASIS021599 Anopheles sinensis ASIS021599 I
ASTEI10695 Anopheles stephensi ASTEI10695 I
Cflo_05798--XP_001122645.1_APIME Camponotus floridanus Cflo_05798--XP_001122645.1_APIME I
CGI_10023955 Crassostrea gigas CGI_10023955 I
CLEC007932 Cimex lectularius CLEC007932 I
Cmyd_10016492 Chelonia mydas Cmyd_10016492 I
CPIJ009732 Culex quinquefasciatus CPIJ009732 I
CpipJ_CPIJ009732 Culex pipiens CpipJ_CPIJ009732 I
ENSAMEG00000014235 Ailuropoda melanoleuca ENSAMEG00000014235 I
ENSAMXG00000025833 Astyanax mexicanus ENSAMXG00000025833 I
HAND2 Bos taurus ENSBTAG00000044123 I
HAND2 Canis familiaris ENSCAFG00000007858 I
HAND2 Callithrix jacchus ENSCJAG00000005144 I
ENSCPOG00000001740 Cavia porcellus ENSCPOG00000001740 I
ENSCSAG00000003094 Chlorocebus sabaeus ENSCSAG00000003094 I
hand2 Danio rerio ENSDARG00000008305 I
HAND2 Dasypus novemcinctus ENSDNOG00000035702 I
Hand2 Dipodomys ordii ENSDORG00000007304 I
HAND2 Equus caballus ENSECAG00000009657 I
ENSFALG00000011490 Ficedula albicollis ENSFALG00000011490 I
HAND2 Felis catus ENSFCAG00000031585 I
HAND2 Homo sapiens ENSG00000164107 D
hand2 Gasterosteus aculeatus ENSGACG00000016418 I
HAND2 Gorilla gorilla ENSGGOG00000006147 I
ENSGMOG00000018978 Gadus morhua ENSGMOG00000018978 I
ENSLACG00000004329 Latimeria chalumnae ENSLACG00000004329 I
HAND2 Loxodonta africana ENSLAFG00000029843 I
ENSLOCG00000012444 Lepisosteus oculatus ENSLOCG00000012444 I
ENSLOCG00000013581 Lepisosteus oculatus ENSLOCG00000013581 I
ENSMEUG00000010715 Macropus eugenii ENSMEUG00000010715 I
HAND2 Microcebus murinus ENSMICG00000009054 I
HAND2 Myotis lucifugus ENSMLUG00000002599 I
ENSMMUG00000018749 Macaca mulatta ENSMMUG00000018749 I
HAND2 Monodelphis domestica ENSMODG00000003548 I
ENSMPUG00000001909 Mustela putorius furo ENSMPUG00000001909 I
Hand2 Mus musculus ENSMUSG00000038193 I
ENSOARG00000015352 Ovis aries ENSOARG00000015352 I
ENSOCUG00000016256 Oryctolagus cuniculus ENSOCUG00000016256 I
HAND2 Otolemur garnettii ENSOGAG00000027928 I
ENSONIG00000016059 Oreochromis niloticus ENSONIG00000016059 I
HAND2 Ochotona princeps ENSOPRG00000010154 I
hand2 Oryzias latipes ENSORLG00000010967 I
ENSP00000352565-D1 Bos grunniens ENSP00000352565-D1 I
ENSPANG00000023378 Papio anubis ENSPANG00000023378 I
ENSPFOG00000009546 Poecilia formosa ENSPFOG00000009546 I
ENSPPYG00000015208 Pongo abelii ENSPPYG00000015208 I
HAND2 Pan troglodytes ENSPTRG00000016601 I
ENSSHAG00000011188 Sarcophilus harrisii ENSSHAG00000011188 I
ENSSSCG00000009703 Sus scrofa ENSSSCG00000009703 I
ENSSTOG00000023020 Ictidomys tridecemlineatus ENSSTOG00000023020 I
HAND2 Tupaia belangeri ENSTBEG00000007591 I
HAND2 Taeniopygia guttata ENSTGUG00000006281 I
hand2 Tetraodon nigroviridis ENSTNIG00000005584 I
HAND2 Tursiops truncatus ENSTTRG00000001365 I
HAND2 Vicugna pacos ENSVPAG00000006724 I
ENSXMAG00000015868 Xiphophorus maculatus ENSXMAG00000015868 I
estExt_fgenesh2_pm.C_20027 Branchiostoma floridae estExt_fgenesh2_pm.C_20027 I
e_gw.829.7.1 Branchiostoma floridae e_gw.829.7.1 I
GB46056 Apis mellifera GB46056 I
Gfo_R010505 Geospiza fortis Gfo_R010505 I
HHAL010291-PA Halyomorpha halys HHAL010291-PA I
Hsal_12649--XP_001122645.1_APIME Harpegnathos saltator Hsal_12649--XP_001122645.1_APIME I
ISCW009436 Ixodes scapularis ISCW009436 I
L798_02599 Zootermopsis nevadensis L798_02599 I
LLOJ007342 Lutzomyia longipalpis LLOJ007342 I
LotgiG104540 Lottia gigantea LotgiG104540 I
NV12516 Nasonia vitripennis NV12516 I
Ocbimv22024043m.g Octopus bimaculoides Ocbimv22024043m.g I
Ogr14661 Ophisaurus gracilis Ogr14661 I
PHUM088400 Pediculus humanus PHUM088400 I
PPAI010228 Phlebotomus papatasi PPAI010228 I
RPRC005573 Rhodnius prolixus RPRC005573 I
Sakowv30003804m.g Saccoglossus kowalevskii Sakowv30003804m.g I
SINV12583 Solenopsis invicta SINV12583 I
SMAR011914 Strigamia maritima SMAR011914 I
SMAR012521 Strigamia maritima SMAR012521 I
tetur18g03540 Tetranychus urticae tetur18g03540 I
hand2 Xenopus tropicalis XB-GENE-481426 I
hand2.S Xenopus laevis XB-GENE-6252408 I
hand2.L Xenopus laevis XB-GENE-865126 I