ECPE_0000966901 (Echinostoma caproni)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 ECPE_0000966901 T198244_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.622 0.622
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.622 0.622
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.622 0.622
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.622 0.622
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ECPE_0000966901-mRNA-1 GCM 260 397

Links

Other GCM family TFs
Other Echinostoma caproni TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10015908 Chelonia mydas Cmyd_10015908 N
ENSAMEG00000009841 Ailuropoda melanoleuca ENSAMEG00000009841 N
HES3 Bos taurus ENSBTAG00000024525 N
ENSBTAP00000034011-D1 Bos grunniens ENSBTAP00000034011-D1 N
HES3 Dasypus novemcinctus ENSDNOG00000032069 N
HES3 Equus caballus ENSECAG00000024724 N
HES3 Loxodonta africana ENSLAFG00000006355 N
HES3 Myotis lucifugus ENSMLUG00000014815 N
ENSOARG00000012818 Ovis aries ENSOARG00000012818 N
HES3 Oryctolagus cuniculus ENSOCUG00000028151 N
HES3 Sus scrofa ENSSSCG00000003370 N
ENSSTOG00000010776 Ictidomys tridecemlineatus ENSSTOG00000010776 N
Myotis_brandtii_HES3_10024028 Myotis brandtii Myotis_brandtii_HES3_10024028 N
Ogr14760 Ophisaurus gracilis Ogr14760 N