SCL3 (Arabidopsis thaliana)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 AT1G50420 T199818_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G50420.1 GRAS 54 479

Links

Other GRAS family TFs
Other Arabidopsis thaliana TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30024.m001746 Ricinus communis 30024.m001746 N 0.753
30131.m007244 Ricinus communis 30131.m007244 N 0.718
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.710
Bo3g179450 Brassica oleracea Bo3g179450 N 0.932
Bo5g078760 Brassica oleracea Bo5g078760 N 0.919
Bo6g022200 Brassica oleracea Bo6g022200 N 0.900
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.981
Bra014251 Brassica rapa Bra014251 N 0.940
Bra018848 Brassica rapa Bra018848 N 0.905
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.984
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.981
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.725
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.725
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.742
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.713
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.757
Ca_11133 Cicer arietinum Ca_11133 N 0.749
Ca_27441 Cicer arietinum Ca_27441 N 0.740
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.755
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.732
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.751
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.763
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.713
Cla006433 Citrullus lanatus Cla006433 N 0.745
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.729
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.705
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.700
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.783
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.981
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.710
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.708
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.784
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.710
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.706
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.731
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.705
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.712
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.704
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.732
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.724
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.766
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.751
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.718
PK02707.1 Cannabis sativa PK02707.1 N 0.702
Pm012190 Prunus mume Pm012190 N 0.760
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.721
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.705
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.778
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.757
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.714
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.762
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.707
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.713
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.719
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.748
TCM_040833 Theobroma cacao TCM_040833 N 0.773
TCM_042392 Theobroma cacao TCM_042392 N 0.715
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.935
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.762
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.708