CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA01G43620
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA01G43620
T200142_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA01G43620.1
GRAS
44
462
LIHLLLAGANFVATGDLQNANLTLEQISQHASLDGDTMQRIASYFSEALADRILKTWPGIHRALNSSRITMVSDEILVQKLFFELLPFLKFSYILTNQAIVEAMEGEKMVHIVDLYGAGPAQWISLLQVLSARPEGPPHLRITGVHHKKEVLDQMAHKLTEEAEKLDIPFQFNPVLSKLENLDFDKLRVKTGEALAISSILQLHSLLALDEDASRRKSPLLSKNSNAIHLQKGLLMNHNTLGDLLDGYSPSPDSASSSPAASSSALMNSESFLNALWGLSPKVMVVTEQDFNHNCLTMMERLAEALFSYAAYFDCLESTVSRASMDRLKLEKMLFGEEIKNIIACEGCERKERHEKMDRWIQRLDLSGFANVPISYYGMLQGRRFLQTYGCEGYKMREECGRVMICWQERSLFSITAWR
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30024.m001746
Ricinus communis
30024.m001746
N
0.715
30131.m007244
Ricinus communis
30131.m007244
N
0.705
Aquca_014_00674
Aquilegia coerulea
Aquca_014_00674
N
cassava1375.valid.m1
Manihot esculenta
cassava1375.valid.m1
N
0.711
cassava1376.valid.m1
Manihot esculenta
cassava1376.valid.m1
N
0.711
cassava20989.m1
Manihot esculenta
cassava20989.m1
N
Ciclev10015219m.g
Citrus clementina
Ciclev10015219m.g
N
0.738
Ciclev10031389m.g
Citrus clementina
Ciclev10031389m.g
N
0.702
Cla020893
Citrullus lanatus
Cla020893
N
Cucsa.308180
Cucumis sativus
Cucsa.308180
N
Eucgr.G03258
Eucalyptus grandis
Eucgr.G03258
N
evm.TU.supercontig_197.7
Carica papaya
evm.TU.supercontig_197.7
N
evm.TU.supercontig_84.12
Carica papaya
evm.TU.supercontig_84.12
N
0.730
gene14438-v1.0-hybrid
Fragaria vesca
gene14438-v1.0-hybrid
N
Gorai.006G125700
Gossypium raimondii
Gorai.006G125700
N
0.753
Gorai.012G080500
Gossypium raimondii
Gorai.012G080500
N
0.713
Gorai.013G015100
Gossypium raimondii
Gorai.013G015100
N
Lus10019773.g
Linum usitatissimum
Lus10019773.g
N
Lus10024177.g
Linum usitatissimum
Lus10024177.g
N
orange1.1g011736m.g
Citrus sinensis
orange1.1g011736m.g
N
0.704
orange1.1g014413m.g
Citrus sinensis
orange1.1g014413m.g
N
0.741
PGSC0003DMG400004649
Solanum tuberosum
PGSC0003DMG400004649
N
0.718
PK02707.1
Cannabis sativa
PK02707.1
N
Pm016466
Prunus mume
Pm016466
N
Pm029840
Prunus mume
Pm029840
N
POPTR_0001s06090
Populus trichocarpa
POPTR_0001s06090
N
POPTR_0003s20100
Populus trichocarpa
POPTR_0003s20100
N
PRUPE_ppa005439mg
Prunus persica
PRUPE_ppa005439mg
N
SapurV1A.0009s0760
Salix purpurea
SapurV1A.0009s0760
N
SapurV1A.0504s0280
Salix purpurea
SapurV1A.0504s0280
N
SapurV1A.1723s0080
Salix purpurea
SapurV1A.1723s0080
N
Solyc12g099900.1
Solanum lycopersicum
Solyc12g099900.1
N
0.718
TCM_040833
Theobroma cacao
TCM_040833
N
0.765
TCM_042392
Theobroma cacao
TCM_042392
N
SCL3
Vitis vinifera
VIT_06s0009g02390
N
0.719
VIT_13s0019g01220
Vitis vinifera
VIT_13s0019g01220
N
0.706