CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G055263
(
Zea mays
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GRMZM2G055263
T200272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G055263_P01
GRAS
125
517
LLHLLMAAAEALSGPQKSRELARVILVRLKQMVSHIGDNAAVSNMERLATHFTDALQGLLDGSHPVGGAGKQAAAAASHGHQQHTGDVLTAFQMLQDMSPYMKFGHFTANQAILEAVAGERRVHVVDYDIAEGVQWASLMQAMTSRPDGVPPPHLRITAVSRGGGGSARAVQEAGRRLAAFAASVGQPFSFGQCRLDSDERFRPATVRMVKGETLVANCVLNQAAATTTVRRPTGSVASFLAGMATLGAKVVTVVEEDQGHAEKDDEGAGGFVARFMEELHRYSAVWDSLEAGFPTQSRVRGLVERAILAPNIAGAVSRAYRAVDGDGEARAGWGEWMRGNGFRAVPLSCFNHSQARLLLGLFNDGYTMEETSPNKIVLGWKARRLLSASVWA
Links
Other
GRAS
family TFs
Other
Zea mays
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_08146
Ascaris suum
ASU_08146
N
Bm5461
Brugia malayi
Bm5461
N
CBG04528
Caenorhabditis briggsae
CBG04528
N
CBN10229
Caenorhabditis brenneri
CBN10229
N
CJA11562
Caenorhabditis japonica
CJA11562
N
CRE07418
Caenorhabditis remanei
CRE07418
N
D917_10060
Trichinella nativa
D917_10060
N
D918_09847
Trichuris suis
D918_09847
N
DME_0000703101
Dracunculus medinensis
DME_0000703101
N
EEL_0001032101
Elaeophora elaphi
EEL_0001032101
N
EFV59144
Trichinella spiralis
EFV59144
N
EVEC_0000343001
Enterobius vermicularis
EVEC_0000343001
N
genemark-nMf.1.1.scaf00700-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf00700-processed-gene-0.2
N
HCOI01126400
Haemonchus contortus
HCOI01126400
N
HPLM_0001514901
Haemonchus placei
HPLM_0001514901
N
L596_g5367
Steinernema carpocapsae
L596_g5367
N
L889_g3580
Steinernema feltiae
L889_g3580
N
L892_g27509
Steinernema scapterisci
L892_g27509
N
L893_g31084
Steinernema glaseri
L893_g31084
N
LOAG_18975
Loa loa
LOAG_18975
N
MhA1_Contig775.frz3.gene10
Meloidogyne hapla
MhA1_Contig775.frz3.gene10
N
nDi.2.2.2.g04953
Dirofilaria immitis
nDi.2.2.2.g04953
N
nLs.2.1.2.g07513
Litomosoides sigmodontis
nLs.2.1.2.g07513
N
nOo.2.0.1.g02662
Onchocerca ochengi
nOo.2.0.1.g02662
N
OFLC_0001352601
Onchocerca flexuosa
OFLC_0001352601
N
PTRK_0000738400
Parastrongyloides trichosuri
PTRK_0000738400
N
scaffold10-EXSNAP2012.60
Pristionchus exspectatus
scaffold10-EXSNAP2012.60
N
SMUV_0000352701
Syphacia muris
SMUV_0000352701
N
SPAL_0001308000
Strongyloides papillosus
SPAL_0001308000
N
SSTP_0000853200
Strongyloides stercoralis
SSTP_0000853200
N
SVE_0358800
Strongyloides venezuelensis
SVE_0358800
N
TCLT_0000738501
Thelazia callipaeda
TCLT_0000738501
N
TMUE_s0104004300
Trichuris muris
TMUE_s0104004300
N
TTRE_0000470901
Trichuris trichiura
TTRE_0000470901
N
WBGene00242326
Onchocerca volvulus
WBGene00242326
N