CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si033320m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si033320m.g
T201527_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si033320m
GRAS
152
535
AEQLLNPCAVAIEAGNLPRAQHLLYVLSELASFSGEPNHRLAAHGLRGLALRLPAAVGQAAAATLKMPPCECPAPAFPGADPRLFRASLIRFNEVSPWFAVPNALANAAIAQAASARGAAAEPRRVHVVDVGVSHGVQWPTLLEALTRVPRGSTPPSVRLAVAGHAATPPAPFSSSPPGYDCSLQLLRYAKTINLDLTIVQAPSLDTLHGILTPGETLVVCLQFRLGHAATDEQAAVLRNIRTLNPELLILAELECGSRSDSSAAIEFAARLENLWMFLDSTAAAFKGRDVDERRVMEAEAGTALAATARRGAAVAGGREAWRARLAAAGFEEAAFGGEAVETAKALLRKYDSGWELVPPSPSAGAAVGLRWKGQPVSFCSLWR
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB08131.1
Alternaria brassicicola
AB08131.1
N
AB10540.1
Alternaria brassicicola
AB10540.1
N
AUEXF2481DRAFT_450827
Aureobasidium subglaciale
AUEXF2481DRAFT_450827
N
BAUCODRAFT_79827
Baudoinia compniacensis
BAUCODRAFT_79827
N
BDDG_00151
Blastomyces dermatitidis
BDDG_00151
N
COCC4DRAFT_194294
Bipolaris maydis
COCC4DRAFT_194294
N
COCCADRAFT_22008
Bipolaris zeicola
COCCADRAFT_22008
N
COCMIDRAFT_26521
Bipolaris oryzae
COCMIDRAFT_26521
N
COCSADRAFT_147534
Bipolaris sorokiniana
COCSADRAFT_147534
N
COCVIDRAFT_33489
Bipolaris victoriae
COCVIDRAFT_33489
N
fgenesh1_pg.C_scaffold_14000107
Cochliobolus heterostrophus C5
fgenesh1_pg.C_scaffold_14000107
N
HCBG_00082
Histoplasma capsulatum
HCBG_00082
N
LEMA_P063520.1
Leptosphaeria maculans
LEMA_P063520.1
N
M437DRAFT_74830
Aureobasidium melanogenum
M437DRAFT_74830
N
M438DRAFT_346203
Aureobasidium pullulans
M438DRAFT_346203
N
M7I_2968
Glarea lozoyensis
M7I_2968
N
PAAG_00749
Paracoccidioides sp lutzii
PAAG_00749
N
PABG_01478
Paracoccidioides brasiliensis
PABG_01478
N
PTRG_08751
Pyrenophora triticirepentis
PTRG_08751
N
PTT_14570
Pyrenophora teres
PTT_14570
N
SETTUDRAFT_182079
Setosphaeria turcica
SETTUDRAFT_182079
N
SNOG_03792
Phaeosphaeria nodorum
SNOG_03792
N
SNOG_03792
Stagonospora nodorum
SNOG_03792
N