CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Aquca_010_00478
(
Aquilegia coerulea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Aquca_010_00478
T202242_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_010_00478.1
GRAS
215
583
LLKSLLLCARISDSEPEKAIKTLNRLRESVSERGDSTERVAFYFSEALFSRISSKSLKNFPTFDSNSEEFLLSYKALNDACPYSKFAHLTANQAILEATESANQIHIVDFGIVQGLQWAALLQALATRSSGKPTLIRISGIPAPALGKSPAASLIATGNRLREFAELLELNIQFEPILTPIEELNESSFRVNSDEVLAVNFMLQLYNLLGETTLAVEKALKLAKSLNPKVLTLGEYEVSLNRVEYYDRFKNAMKYYSAVFESLEPSLERDSEDRLQVERLILGRRIMSVVGPGEGSMRRERMEEKEEWKNLIESCGFEAIAVSHYAVSQADILLWNYNYSSKYSLVESPPGFLSLCWNGTPLLTVSSWR
Links
Other
GRAS
family TFs
Other
Aquilegia coerulea
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29634.m002156
Ricinus communis
29634.m002156
N
0.745
Aquca_013_00373
Aquilegia coerulea
Aquca_013_00373
N
0.861
cassava18797.valid.m1
Manihot esculenta
cassava18797.valid.m1
N
0.725
cassava35611.valid.m1
Manihot esculenta
cassava35611.valid.m1
N
0.733
Cla014744
Citrullus lanatus
Cla014744
N
0.714
Cucsa.201400
Cucumis sativus
Cucsa.201400
N
0.705
Eucgr.I02451
Eucalyptus grandis
Eucgr.I02451
N
0.716
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
0.714
gene14780-v1.0-hybrid
Fragaria vesca
gene14780-v1.0-hybrid
N
0.716
Gorai.003G015400
Gossypium raimondii
Gorai.003G015400
N
0.722
Gorai.008G068100
Gossypium raimondii
Gorai.008G068100
N
0.730
Lus10024014.g
Linum usitatissimum
Lus10024014.g
N
0.714
Lus10041740.g
Linum usitatissimum
Lus10041740.g
N
0.716
MDP0000575908
Malus domestica
MDP0000575908
N
0.710
mgf021185m
Mimulus guttatus
mgf021185m
N
0.701
PK13108.1
Cannabis sativa
PK13108.1
N
0.701
Pm026616
Prunus mume
Pm026616
N
0.728
POPTR_0005s12520
Populus trichocarpa
POPTR_0005s12520
N
0.708
PRUPE_ppa003124mg
Prunus persica
PRUPE_ppa003124mg
N
0.730
TCM_000399
Theobroma cacao
TCM_000399
N
0.766
VIT_04s0023g01660
Vitis vinifera
VIT_04s0023g01660
N
0.722