CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10000940m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10000940m.g
T202375_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10000940m
GRAS
107
488
LVHLLMAAAEALTGVNKSRELAQVILVRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKHNTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALSRGGSGRRSISTVQETGRRLVAFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPKLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSLARIYRTCGEEEVYSWGDWLGAVGFKPVNISFANHCQAKLLLGLFNDGYRVEELANNRLVLGWKSRRLLSASVWT
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA014540
Oryza indica
BGIOSGA014540
N
BRADI5G18430
Brachypodium distachyon
BRADI5G18430
N
F775_07886
Aegilops tauschii
F775_07886
N
F775_08955
Aegilops tauschii
F775_08955
N
GRMZM2G057131
Zea mays
GRMZM2G057131
N
GRMZM2G472589
Zea mays
GRMZM2G472589
N
LPERR04G17810
Leersia perrieri
LPERR04G17810
N
MLOC_11130
Hordeum vulgare
MLOC_11130
N
OB04G28790
Oryza brachyantha
OB04G28790
N
OBART04G21780
Oryza barthii
OBART04G21780
N
OLONG_013577
Oryza longistaminata
OLONG_013577
N
OMERI04G18340
Oryza meridionalis
OMERI04G18340
N
ONIVA04G20320
Oryza nivara
ONIVA04G20320
N
OPUNC04G19530
Oryza punctata
OPUNC04G19530
N
ORGLA04G0188200
Oryza glaberrima
ORGLA04G0188200
N
ORUFI09G04820
Oryza rufipogon
ORUFI09G04820
N
OS04G0564000
Oryza sativa
OS04G0564000
N
Pavir.Ga01021
Panicum virgatum
Pavir.Ga01021
N
Pavir.J21884
Panicum virgatum
Pavir.J21884
N
Sb06g025420
Sorghum bicolor
Sb06g025420
N
Si010837m.g
Setaria italica
Si010837m.g
N
Si012648m.g
Setaria italica
Si012648m.g
N
Traes_2AL_39432DCB1
Triticum aestivum
Traes_2AL_39432DCB1
N
Traes_2AL_BC4CD296F
Triticum aestivum
Traes_2AL_BC4CD296F
N
Traes_2BL_7BC3DF5C7
Triticum aestivum
Traes_2BL_7BC3DF5C7
N
Traes_2BL_E8D551BE0
Triticum aestivum
Traes_2BL_E8D551BE0
N
Traes_2DL_92641C6CC
Triticum aestivum
Traes_2DL_92641C6CC
N
Traes_2DL_D8AD25F43
Triticum aestivum
Traes_2DL_D8AD25F43
N
TRIUR3_21912
Triticum urartu
TRIUR3_21912
N
TRIUR3_21913
Triticum urartu
TRIUR3_21913
N