CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_81.122
(
Carica papaya
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
evm.TU.supercontig_81.122
T202537_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_81.122
GRAS
310
669
LSTLLMQCAQCVSSFDQRTATELLKQIRQHSSQFGDGTQRMAFYFANALEVRMAGAKTPVYSPILSCKTSAAEILQAYEVYVTACPFKKMSNFFANKTIVKLAEKATRLHIIDFGILYGFQWPCLIQRLSSRPNGPPNLRITGIELPQPGFRPAERVQETGHRLKRYCERFNVPFEYNFIAKKWETIKLEDLKIDRDETTVVNCLYRMKNIPDDTMVVNSSRDTVMKLIKEINPDLFVHGVVNGTYNAPFFVTRFREALFHFSSLFDMFEATVPREDQQRMMFEREVFGRDAMNVIACEGTERVERPETYKQWQVRNLRMGFRQLPLDHEILKRVKTMVKSSYHGDFVIDVDGRGGLRAL
Links
Other
GRAS
family TFs
Other
Carica papaya
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_01417
Capronia epimyces
A1O3_01417
N
A1O5_07693
Cladophialophora psammophila
A1O5_07693
N
A1O7_05653
Cladophialophora yegresii
A1O7_05653
N
G647_06868
Cladophialophora carrionii
G647_06868
N
HMPREF1120_08516
Exophiala dermatitidis
HMPREF1120_08516
N
PV04_06029
Capronia semiimmersa
PV04_06029
N
PV06_00511
Exophiala oligosperma
PV06_00511
N
PV07_04067
Cladophialophora immunda
PV07_04067
N
Z517_00588
Fonsecaea pedrosoi
Z517_00588
N
Z519_07516
Cladophialophora bantiana
Z519_07516
N