CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10041540.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10041540.g
T202791_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10041540
GRAS
327
691
LVHLLLACAEAVAKEDYMLARKYLHHLNRVVSPLGDSMQRVAACFTEALSARLAATLATKPTTSAPRPFTPFPSNSMEILKIYQILYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGSSPECVRETGRCLTELAHSLYVPFEYHAVAEELEDLKPHMFNRRVGEALAVNSVNRLHRVPGRSIGPLLGMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQYIFAPEIKNIVACEGVERTERHERLEKWRKVMEGKGFKGVALSGNAVTQSKILLGLYSCDGYRLTEDNGCLLLGWQDRAILAASAWR
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF239
Bos taurus
ENSBTAG00000019039
N
ZNF239
Canis familiaris
ENSCAFG00000031910
N
ZNF239
Callithrix jacchus
ENSCJAG00000016278
N
ENSCSAG00000018415
Chlorocebus sabaeus
ENSCSAG00000018415
N
ZNF239
Dasypus novemcinctus
ENSDNOG00000004406
N
ZNF239
Equus caballus
ENSECAG00000003179
N
ZNF239
Felis catus
ENSFCAG00000023538
N
ZNF239
Homo sapiens
ENSG00000196793
N
ZNF239
Gorilla gorilla
ENSGGOG00000001913
N
ENSMMUG00000022433
Macaca mulatta
ENSMMUG00000022433
N
ENSMPUG00000020136
Mustela putorius furo
ENSMPUG00000020136
N
ENSNLEG00000015896
Nomascus leucogenys
ENSNLEG00000015896
N
ENSOARG00000003720
Ovis aries
ENSOARG00000003720
N
ZNF239
Oryctolagus cuniculus
ENSOCUG00000010992
N
ENSPANG00000022661
Papio anubis
ENSPANG00000022661
N
ZNF239
Procavia capensis
ENSPCAG00000006595
N
ENSPPYG00000002214
Pongo abelii
ENSPPYG00000002214
N
ZNF239
Pan troglodytes
ENSPTRG00000022725
N
ZNF239
Sus scrofa
ENSSSCG00000029576
N
ENSTSYG00000004834
Tarsius syrichta
ENSTSYG00000004834
N
ZNF239
Vicugna pacos
ENSVPAG00000012405
N
Myotis_brandtii_ZNF239_10002120
Myotis brandtii
Myotis_brandtii_ZNF239_10002120
N