CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000254936
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000254936
T202840_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000254936
GRAS
166
536
LKDVLIDCARAISENELDNAICLMEVLGQMVSVSGEPMQRLGAYMLEGLRARLERSGSSIYKTLKCEVPTSSQLMSYMSVLYKICPYWRFAYMSANVVIREALENEPRIHIIDFQIAQGSQWIPLIQDLARQPGGPPRIRITGVDDTQSEHARGGGLHIVGNRLSELAASCNVPFEFNAAAMCGSEVELHNLRILPGEAIAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFFSRFVEMVDYYTAMFESIDVACPRDDKQRISAEMHCVARDIVNMVACEGAERVERHEPFGKWRSRLTMDGFTPYPLSPKVTEAIRVLLKEYHGNFRVQEANGALYLSWMQRAMATSSAWR
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_02538
Cladophialophora psammophila
A1O5_02538
N
A1O7_07518
Cladophialophora yegresii
A1O7_07518
N
A1O9_04560
Exophiala aquamarina
A1O9_04560
N
G647_02570
Cladophialophora carrionii
G647_02570
N
HMPREF1120_02144
Exophiala dermatitidis
HMPREF1120_02144
N
PV04_07986
Capronia semiimmersa
PV04_07986
N
PV05_05234
Exophiala xenobiotica
PV05_05234
N
PV06_00308
Exophiala oligosperma
PV06_00308
N
PV07_11490
Cladophialophora immunda
PV07_11490
N
PV08_04145
Exophiala spinifera
PV08_04145
N
PV10_07236
Exophiala mesophila
PV10_07236
N
PV11_01410
Exophiala sideris
PV11_01410
N
Z517_02882
Fonsecaea pedrosoi
Z517_02882
N
Z519_07068
Cladophialophora bantiana
Z519_07068
N