CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000784909
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000784909
T202901_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000784909
GRAS
388
747
VIDQLFNAAELIETGNSVLAQGILARLNHQLSPIGKPFSRAAFYFKEALQLLLHTNTSSNCSSALSPFSLIFKIGAYKSFSEISPVVQFANFTCNQAILEAVEGFNRVHVIDFDIGYGGQWASFMQEVALGNGGVPSLKITAFISSSTHDEFEVSFTRENLKHFASELNLAFELELVSLESLNSGSWGLPLHASEGVAVAVNLPIGSFSNNPLSLPLILRFVKQLSPRIVVSLDRGSDRIDVPFPHQIIQAIHSYSGLLESIDAANVNPDALQKIERYLLQPGIEKIVTGRHLLPKRTPSWRTLFLSSGFSPLTFSNFTESQAECLVQRTPVGGFHIEKKQSSLVLCWQCKDLISASAWR
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10019094m.g
Citrus clementina
Ciclev10019094m.g
N
0.701
evm.TU.supercontig_49.157
Carica papaya
evm.TU.supercontig_49.157
N
0.701
gene03956-v1.0-hybrid
Fragaria vesca
gene03956-v1.0-hybrid
N
0.811
orange1.1g005326m.g
Citrus sinensis
orange1.1g005326m.g
N
0.701
PGSC0003DMG400025973
Solanum tuberosum
PGSC0003DMG400025973
N
0.702
PK17954.1
Cannabis sativa
PK17954.1
N
0.725
Pm017821
Prunus mume
Pm017821
N
0.844
PRUPE_ppa001781mg
Prunus persica
PRUPE_ppa001781mg
N
0.847
SapurV1A.0382s0350
Salix purpurea
SapurV1A.0382s0350
N
0.705
SapurV1A.1971s0010
Salix purpurea
SapurV1A.1971s0010
N
0.705
TCM_005571
Theobroma cacao
TCM_005571
N
0.704
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.713