Pavir.Ba01071 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ba01071 T202972_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba01071.1.p GRAS 176 582
Pavir.Ba01071.2.p GRAS 176 582
Pavir.Ba01071.3.p GRAS 176 582

Links

Other GRAS family TFs
Other Panicum virgatum TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SHR2 Oryza indica BGIOSGA010480 N 0.867
SHR1 Oryza indica BGIOSGA026037 N 0.962
BRADI1G23060 Brachypodium distachyon BRADI1G23060 N 0.894
GRMZM2G019060 Zea mays GRMZM2G019060 N 0.954
GRMZM2G132794 Zea mays GRMZM2G132794 N 0.870
GRMZM2G172657 Zea mays GRMZM2G172657 N 0.967
GSMUA_Achr1G22470_001 Musa acuminata GSMUA_Achr1G22470_001 N 0.770
GSMUA_Achr4G16460_001 Musa acuminata GSMUA_Achr4G16460_001 N 0.759
GSMUA_Achr8G30950_001 Musa acuminata GSMUA_Achr8G30950_001 N 0.791
LPERR07G17740 Leersia perrieri LPERR07G17740 N 0.962
MLOC_62665 Hordeum vulgare MLOC_62665 N 0.932
OB03G31410 Oryza brachyantha OB03G31410 N 0.880
OB07G26110 Oryza brachyantha OB07G26110 N 0.835
OBART07G20430 Oryza barthii OBART07G20430 N 0.889
OGLUM03G23190 Oryza glumaepatula OGLUM03G23190 N 0.867
OGLUM07G20210 Oryza glumaepatula OGLUM07G20210 N 0.965
OMERI03G20220 Oryza meridionalis OMERI03G20220 N 0.867
OMERI07G17100 Oryza meridionalis OMERI07G17100 N 0.962
ONIVA03G24000 Oryza nivara ONIVA03G24000 N 0.867
ONIVA07G18840 Oryza nivara ONIVA07G18840 N 0.962
OPUNC03G21050 Oryza punctata OPUNC03G21050 N 0.865
OPUNC07G19280 Oryza punctata OPUNC07G19280 N 0.962
ORGLA03G0208800 Oryza glaberrima ORGLA03G0208800 N 0.867
ORGLA07G0156800 Oryza glaberrima ORGLA07G0156800 N 0.962
ORUFI03G23130 Oryza rufipogon ORUFI03G23130 N 0.867
ORUFI07G21310 Oryza rufipogon ORUFI07G21310 N 0.965
SHR2 Oryza sativa OS03G0433200 N 0.865
SHR1 Oryza sativa OS07G0586900 N 0.965
Pavir.Bb01182 Panicum virgatum Pavir.Bb01182 N 0.984
Pavir.Ia02979 Panicum virgatum Pavir.Ia02979 N 0.873
Pavir.Ib01878 Panicum virgatum Pavir.Ib01878 N 0.797
Sb02g037890 Sorghum bicolor Sb02g037890 N 0.978
Si029296m.g Setaria italica Si029296m.g N 0.984
Si034653m.g Setaria italica Si034653m.g N 0.873
Traes_2BS_736EF207B1 Triticum aestivum Traes_2BS_736EF207B1 N 0.940