Pavir.Bb01182 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Bb01182 T202973_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb01182.1.p GRAS 186 593

Links

Other GRAS family TFs
Other Panicum virgatum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SHR2 Oryza indica BGIOSGA010480 N 0.879
SHR1 Oryza indica BGIOSGA026037 N 0.951
BRADI1G23060 Brachypodium distachyon BRADI1G23060 N 0.904
GRMZM2G019060 Zea mays GRMZM2G019060 N 0.949
GRMZM2G132794 Zea mays GRMZM2G132794 N 0.865
GRMZM2G172657 Zea mays GRMZM2G172657 N 0.954
GSMUA_Achr1G22470_001 Musa acuminata GSMUA_Achr1G22470_001 N 0.770
GSMUA_Achr4G16460_001 Musa acuminata GSMUA_Achr4G16460_001 N 0.759
GSMUA_Achr8G30950_001 Musa acuminata GSMUA_Achr8G30950_001 N 0.793
LPERR07G17740 Leersia perrieri LPERR07G17740 N 0.951
MLOC_62665 Hordeum vulgare MLOC_62665 N 0.921
OB03G31410 Oryza brachyantha OB03G31410 N 0.872
OB07G26110 Oryza brachyantha OB07G26110 N 0.822
OBART07G20430 Oryza barthii OBART07G20430 N 0.883
OGLUM03G23190 Oryza glumaepatula OGLUM03G23190 N 0.879
OGLUM07G20210 Oryza glumaepatula OGLUM07G20210 N 0.954
OMERI03G20220 Oryza meridionalis OMERI03G20220 N 0.879
OMERI07G17100 Oryza meridionalis OMERI07G17100 N 0.951
ONIVA03G24000 Oryza nivara ONIVA03G24000 N 0.879
ONIVA07G18840 Oryza nivara ONIVA07G18840 N 0.951
OPUNC03G21050 Oryza punctata OPUNC03G21050 N 0.877
OPUNC07G19280 Oryza punctata OPUNC07G19280 N 0.951
ORGLA03G0208800 Oryza glaberrima ORGLA03G0208800 N 0.879
ORGLA07G0156800 Oryza glaberrima ORGLA07G0156800 N 0.949
ORUFI03G23130 Oryza rufipogon ORUFI03G23130 N 0.879
ORUFI07G21310 Oryza rufipogon ORUFI07G21310 N 0.954
SHR2 Oryza sativa OS03G0433200 N 0.877
SHR1 Oryza sativa OS07G0586900 N 0.954
Pavir.Ba01071 Panicum virgatum Pavir.Ba01071 N 0.984
Pavir.Ia02979 Panicum virgatum Pavir.Ia02979 N 0.867
Pavir.Ib01878 Panicum virgatum Pavir.Ib01878 N 0.846
Sb02g037890 Sorghum bicolor Sb02g037890 N 0.967
Si029296m.g Setaria italica Si029296m.g N 0.973
Si034653m.g Setaria italica Si034653m.g N 0.867
Traes_2AS_D0B21BF981 Triticum aestivum Traes_2AS_D0B21BF981 N 0.874
Traes_2BS_736EF207B1 Triticum aestivum Traes_2BS_736EF207B1 N 0.930
Traes_2DS_3B4535629 Triticum aestivum Traes_2DS_3B4535629 N 0.907
TRIUR3_26966 Triticum urartu TRIUR3_26966 N 0.934