CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Hb01986
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Hb01986
T203017_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Hb01986.1.p
GRAS
46
487
LIGLLYQCAAEVAAGALDRANHSLEQITQLASLDAPHTLQRLAAVFADALARKLLSLVPGLSRALLSTANSGEAHLVPAARRHLFDMVPFMKLAYLTTNHAILEAMEGEKFVHVVDLSGPASNPVQWVALFHALRARRGGPPQLRITAVHDGKEFLANMAGALARDAEALDIPFQFSAVEARLEDLDPDALRQLLRVRSGEVLAISVVSQLHRLLAADDAAGRSRLHVPGSSCLTPVQIMARSSPSSFGELLERELNTRLQLSPDSPSVVSSLSPQSSPAAAAKLGRFLQAVRALSPKIMVVAEPEANHNAAAFLERFEEALNYYASLFDCLERAAAAQRQRWAAERARVERLVLGEEVRGVVAREGAERKERHERLAQWARRMEAAGMERVGMSFAGMMEARKLLQSLGWGGSYEVVHDARGQAFFFCWHRRPLYSVSAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_066250
Aspergillus clavatus
CADACLAG00006220
N
CADAFLAG00012354
Aspergillus flavus
CADAFLAG00012354
N
ANIA_03369
Aspergillus nidulans
CADANIAG00009673
N
ATEG_05520
Aspergillus terreus
CADATEAG00004413
N
ATEG_08685
Aspergillus terreus
CADATEAG00006707
N
e_gw1.00868.19.1
Aspergillus carbonarius
e_gw1.00868.19.1
N
M408DRAFT_327253
Serendipita vermifera
M408DRAFT_327253
N
Pc16g06860
Penicillium chrysogenum
Pc16g06860
N
Pc21g13820
Penicillium chrysogenum
Pc21g13820
N
PCH_Pc16g06860
Penicillium rubens
PCH_Pc16g06860
N
PCH_Pc21g13820
Penicillium rubens
PCH_Pc21g13820
N
PDE_05999
Penicillium oxalicum
PDE_05999
N
PDIP_05790
Penicillium digitatum
PDIP_05790
N
PDIP_55190
Penicillium digitatum
PDIP_55190
N
PEX1_026370
Penicillium expansum
PEX1_026370
N
PEX1_033140
Penicillium expansum
PEX1_033140
N
PITC_043160
Penicillium italicum
PITC_043160
N
PMAA_045030
Talaromyces marneffei
PMAA_045030
N
PMAA_045030
Penicillium marneffei
PMAA_045030
N
TSTA_034230
Talaromyces stipitatus
TSTA_034230
N