CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPC735_023880
(
Coccidioides posadasii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CPC735_023880
T206078_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN
NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.793
0.895
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EER27052
Homeodomain
52
108
RQRRRRTSPEDYAILEAEYQRNPKPDKVTRANIVSRVSLGDKEVQIWFQNRRQNDRR
Links
Other
Homeodomain
family TFs
Other
Coccidioides posadasii
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29848.m004632
Ricinus communis
29848.m004632
I
0.000
SHN3
Arabidopsis lyrata
Al_scaffold_0006_1028
I
0.000
SHN2
Arabidopsis thaliana
AT5G11190
D
0.000
SHN3
Arabidopsis thaliana
AT5G25390
I
0.000
Bo7g096000
Brassica oleracea
Bo7g096000
N
0.000
Bo9g011380
Brassica oleracea
Bo9g011380
I
0.000
Bo9g171490
Brassica oleracea
Bo9g171490
I
0.000
Bostr.23997s0014
Boechera stricta
Bostr.23997s0014
I
0.000
Bostr.29827s0278
Boechera stricta
Bostr.29827s0278
I
0.000
Bra008985
Brassica rapa
Bra008985
I
0.000
Bra036543
Brassica rapa
Bra036543
I
0.000
Cagra.1110s0005
Capsella grandiflora
Cagra.1110s0005
I
0.000
Carubv10002040m.g
Capsella rubella
Carubv10002040m.g
I
0.000
Carubv10003042m.g
Capsella rubella
Carubv10003042m.g
I
0.000
Carubv10003050m.g
Capsella rubella
Carubv10003050m.g
I
0.000
cassava10120.m1
Manihot esculenta
cassava10120.m1
I
0.000
cassava30505.valid.m1
Manihot esculenta
cassava30505.valid.m1
I
0.000
cassava40012.m1
Manihot esculenta
cassava40012.m1
I
0.000
Ca_01764
Cicer arietinum
Ca_01764
I
0.000
Ca_09050
Cicer arietinum
Ca_09050
I
0.000
Ciclev10009526m.g
Citrus clementina
Ciclev10009526m.g
I
0.000
Cla021283
Citrullus lanatus
Cla021283
I
0.000
Cucsa.310360
Cucumis sativus
Cucsa.310360
I
0.000
evm.TU.supercontig_259.2
Carica papaya
evm.TU.supercontig_259.2
I
0.000
SHN2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002026
I
0.000
gene11636-v1.0-hybrid
Fragaria vesca
gene11636-v1.0-hybrid
I
0.000
GLYMA04G07140
Glycine max
GLYMA04G07140
I
0.000
GLYMA06G07240
Glycine max
GLYMA06G07240
I
0.000
GLYMA17G31900
Glycine max
GLYMA17G31900
I
0.000
Gorai.001G033200
Gossypium raimondii
Gorai.001G033200
I
0.000
Gorai.004G292600
Gossypium raimondii
Gorai.004G292600
I
0.000
Gorai.010G114800
Gossypium raimondii
Gorai.010G114800
I
0.000
Gorai.011G082900
Gossypium raimondii
Gorai.011G082900
I
0.000
Lus10002015.g
Linum usitatissimum
Lus10002015.g
I
0.000
Lus10002912.g
Linum usitatissimum
Lus10002912.g
I
0.000
Lus10019414.g
Linum usitatissimum
Lus10019414.g
I
0.000
MDP0000178263
Malus domestica
MDP0000178263
I
0.000
MDP0000287350
Malus domestica
MDP0000287350
I
0.000
mgf017744m
Mimulus guttatus
mgf017744m
I
0.000
MTR_1g012470
Medicago truncatula
MTR_1g012470
I
0.000
MTR_3g107380
Medicago truncatula
MTR_3g107380
I
0.000
orange1.1g028913m.g
Citrus sinensis
orange1.1g028913m.g
I
0.000
PGSC0003DMG400030228
Solanum tuberosum
PGSC0003DMG400030228
I
0.000
Pm004616
Prunus mume
Pm004616
I
0.000
POPTR_0006s26990
Populus trichocarpa
POPTR_0006s26990
I
0.000
POPTR_0018s01680
Populus trichocarpa
POPTR_0018s01680
I
0.000
PRUPE_ppa023908mg
Prunus persica
PRUPE_ppa023908mg
I
0.000
SapurV1A.0043s0690
Salix purpurea
SapurV1A.0043s0690
I
0.000
SapurV1A.0192s0020
Salix purpurea
SapurV1A.0192s0020
I
0.000
TCM_037007
Theobroma cacao
TCM_037007
I
0.000
Thhalv10005514m.g
Eutrema salsugineum
Thhalv10005514m.g
I
0.000
Thhalv10015363m.g
Eutrema salsugineum
Thhalv10015363m.g
I
0.000
VIT_04s0008g05440
Vitis vinifera
VIT_04s0008g05440
I
0.000