irx6a (Danio rerio)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSDARG00000034420 T208587_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.822 0.895
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.777 0.842
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.776 0.842
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.776 0.842
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.776 0.842
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.776 0.842
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.776 0.842
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.776 0.842
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.768 0.807
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.768 0.807
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.768 0.807
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.768 0.807
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.768 0.807
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.768 0.807
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000045627 Homeodomain 149 208

Links

Other Homeodomain family TFs
Other Danio rerio TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10002847 Chelonia mydas Cmyd_10002847 N 0.000
ENSAMEG00000001827 Ailuropoda melanoleuca ENSAMEG00000001827 N 0.000
TCF23 Bos taurus ENSBTAG00000014813 N 0.000
TCF23 Canis familiaris ENSCAFG00000030192 N 0.000
TCF23 Choloepus hoffmanni ENSCHOG00000004803 N 0.000
TCF23 Callithrix jacchus ENSCJAG00000001198 N 0.000
ENSCPOG00000003785 Cavia porcellus ENSCPOG00000003785 N 0.000
ENSCSAG00000009631 Chlorocebus sabaeus ENSCSAG00000009631 N 0.000
ENSDNOG00000030981 Dasypus novemcinctus ENSDNOG00000030981 N 0.000
Tcf23 Dipodomys ordii ENSDORG00000014403 N 0.000
TCF23 Equus caballus ENSECAG00000021374 N 0.000
TCF23 Erinaceus europaeus ENSEEUG00000007250 N 0.000
TCF23 Felis catus ENSFCAG00000022795 N 0.000
TCF23 Homo sapiens ENSG00000163792 N 0.000
TCF23 Gorilla gorilla ENSGGOG00000002612 N 0.000
TCF23 Loxodonta africana ENSLAFG00000014587 N 0.000
ENSLOCG00000015901 Lepisosteus oculatus ENSLOCG00000015901 N 0.000
ENSMEUG00000010665 Macropus eugenii ENSMEUG00000010665 N 0.000
TCF23 Microcebus murinus ENSMICG00000017064 N 0.000
TCF23 Macaca mulatta ENSMMUG00000015867 N 0.000
TCF23 Monodelphis domestica ENSMODG00000015714 N 0.000
Tcf23 Mus musculus ENSMUSG00000006642 N 0.000
ENSNLEG00000003009 Nomascus leucogenys ENSNLEG00000003009 N 0.000
TCF23 Ornithorhynchus anatinus ENSOANG00000003936 N 0.000
ENSOARG00000019168 Ovis aries ENSOARG00000019168 N 0.000
ENSOCUG00000008655 Oryctolagus cuniculus ENSOCUG00000008655 N 0.000
TCF23 Otolemur garnettii ENSOGAG00000006528 N 0.000
ENSOPRG00000010556 Ochotona princeps ENSOPRG00000010556 N 0.000
ENSP00000296096 Macaca fascicularis ENSP00000296096 N 0.000
ENSP00000296096-D1 Bos grunniens ENSP00000296096-D1 N 0.000
ENSPANG00000009856 Papio anubis ENSPANG00000009856 N 0.000
ENSPPYG00000012560 Pongo abelii ENSPPYG00000012560 N 0.000
ENSPVAG00000015152 Pteropus vampyrus ENSPVAG00000015152 N 0.000
Tcf23 Rattus norvegicus ENSRNOG00000025736 N 0.000
ENSSHAG00000012462 Sarcophilus harrisii ENSSHAG00000012462 N 0.000
TCF23 Sus scrofa ENSSSCG00000027409 N 0.000
ENSSTOG00000015523 Ictidomys tridecemlineatus ENSSTOG00000015523 N 0.000
TCF23 Tupaia belangeri ENSTBEG00000006967 N 0.000
TCF23 Tursiops truncatus ENSTTRG00000005255 N 0.000
Myotis_brandtii_TCF23_10031193 Myotis brandtii Myotis_brandtii_TCF23_10031193 N 0.000