IRX2 (Equus caballus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSECAG00000015758 T209149_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000013358 Homeodomain 34 93

Links

Other Homeodomain family TFs
Other Equus caballus TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30068.m002619 Ricinus communis 30068.m002619 I 0.000
Aquca_020_00034 Aquilegia coerulea Aquca_020_00034 I 0.000
Aquca_020_00035 Aquilegia coerulea Aquca_020_00035 I 0.000
NAC014 Arabidopsis thaliana AT1G33060 I 0.000
NTL9 Arabidopsis thaliana AT4G35580 D 0.000
Bo5g086780 Brassica oleracea Bo5g086780 I 0.000
Bostr.3359s0059 Boechera stricta Bostr.3359s0059 I 0.000
Bostr.7867s1416 Boechera stricta Bostr.7867s1416 I 0.000
Bra010193 Brassica rapa Bra010193 I 0.000
Cagra.1443s0001 Capsella grandiflora Cagra.1443s0001 I 0.000
Cagra.2350s0100 Capsella grandiflora Cagra.2350s0100 I 0.000
Carubv10007613m.g Capsella rubella Carubv10007613m.g I 0.000
Carubv10008529m.g Capsella rubella Carubv10008529m.g I 0.000
Eucgr.A00969 Eucalyptus grandis Eucgr.A00969 N 0.000
Eucgr.E01095 Eucalyptus grandis Eucgr.E01095 I 0.000
evm.TU.supercontig_37.112 Carica papaya evm.TU.supercontig_37.112 I 0.000
ANAC014 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002639 I 0.000
NTL9 Arabidopsis lyrata fgenesh2_kg.7__521__AT4G35580.1 I 0.000
gene01851-v1.0-hybrid Fragaria vesca gene01851-v1.0-hybrid I 0.000
Gorai.003G073300 Gossypium raimondii Gorai.003G073300 I 0.000
Gorai.008G261400 Gossypium raimondii Gorai.008G261400 I 0.000
Lus10008285.g Linum usitatissimum Lus10008285.g I 0.000
Lus10010148.g Linum usitatissimum Lus10010148.g I 0.000
Lus10033251.g Linum usitatissimum Lus10033251.g I 0.000
MDP0000266908 Malus domestica MDP0000266908 I 0.000
MDP0000658409 Malus domestica MDP0000658409 I 0.000
mgf022344m Mimulus guttatus mgf022344m I 0.000
orange1.1g009388m.g Citrus sinensis orange1.1g009388m.g I 0.000
PK02019.1 Cannabis sativa PK02019.1 I 0.000
Pm029581 Prunus mume Pm029581 I 0.000
POPTR_0001s45700 Populus trichocarpa POPTR_0001s45700 I 0.000
POPTR_0011s15230 Populus trichocarpa POPTR_0011s15230 I 0.000
PRUPE_ppa001291mg Prunus persica PRUPE_ppa001291mg I 0.000
SapurV1A.0285s0090 Salix purpurea SapurV1A.0285s0090 I 0.000
SapurV1A.0666s0060 Salix purpurea SapurV1A.0666s0060 N 0.000
TCM_015584 Theobroma cacao TCM_015584 I 0.000
Thhalv10007021m.g Eutrema salsugineum Thhalv10007021m.g I 0.000
VIT_02s0025g03020 Vitis vinifera VIT_02s0025g03020 I 0.000