IRX4 (Gallus gallus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSGALG00000022896 T210277_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.867 1.000
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.788 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.788 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.788 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.780 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.780 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.780 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.893
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.893
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.893
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.893
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.893
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000036193 Homeodomain 143 201

Links

Other Homeodomain family TFs
Other Gallus gallus TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02576 Capronia coronata A1O1_02576 I 0.000
A1O3_05449 Capronia epimyces A1O3_05449 I 0.000
A1O5_01242 Cladophialophora psammophila A1O5_01242 I 0.000
A1O7_08736 Cladophialophora yegresii A1O7_08736 I 0.000
A1O9_12266 Exophiala aquamarina A1O9_12266 I 0.000
ACRE_013080 Acremonium chrysogenum ACRE_013080 I 0.000
AOL_s00043g74 Arthrobotrys oligospora AOL_s00043g74 I 0.000
ARB_05956 Arthroderma benhamiae ARB_05956 I 0.000
AUEXF2481DRAFT_4094 Aureobasidium subglaciale AUEXF2481DRAFT_4094 I 0.000
BAUCODRAFT_269899 Baudoinia compniacensis BAUCODRAFT_269899 I 0.000
BBA_00488 Beauveria bassiana BBA_00488 I 0.000
BDDG_07691 Blastomyces dermatitidis BDDG_07691 I 0.000
BGHDH14_bgh03757 Blumeria graminis BGHDH14_bgh03757 I 0.000
ACLA_055970 Aspergillus clavatus CADACLAG00005179 I 0.000
CADAFLAG00008024 Aspergillus flavus CADAFLAG00008024 I 0.000
AFUA_4G02940 Aspergillus fumigatus CADAFUAG00001401 I 0.000
CADANGAG00011236 Aspergillus niger CADANGAG00011236 I 0.000
ANIA_10378 Aspergillus nidulans CADANIAG00009880 D 0.000
ATEG_07901 Aspergillus terreus CADATEAG00000497 I 0.000
NFIA_030610 Neosartorya fischeri CADNFIAG00002762 I 0.000
CFIO01_07847 Colletotrichum fioriniae CFIO01_07847 I 0.000
CGGC5_1206 Colletotrichum gloeosporioides CGGC5_1206 I 0.000
CH063_13592 Colletotrichum higginsianum CH063_13592 I 0.000
CIMG_08892 Coccidioides immitis CIMG_08892 I 0.000
CMQ_2549 Grosmannia clavigera CMQ_2549 I 0.000
Cob_10575 Colletotrichum orbiculare Cob_10575 I 0.000
COCC4DRAFT_40407 Bipolaris maydis COCC4DRAFT_40407 I 0.000
COCCADRAFT_6984 Bipolaris zeicola COCCADRAFT_6984 I 0.000
COCMIDRAFT_33369 Bipolaris oryzae COCMIDRAFT_33369 I 0.000
COCSADRAFT_97657 Bipolaris sorokiniana COCSADRAFT_97657 I 0.000
COCVIDRAFT_17332 Bipolaris victoriae COCVIDRAFT_17332 I 0.000
CPC735_064040 Coccidioides posadasii CPC735_064040 I 0.000
CPUR_06057 Claviceps purpurea CPUR_06057 I 0.000
CSUB01_02829 Colletotrichum sublineola CSUB01_02829 I 0.000
CTHT_0032650 Chaetomium thermophilum CTHT_0032650 I 0.000
DOTSEDRAFT_73911 Dothistroma septosporum DOTSEDRAFT_73911 I 0.000
DRE_06529 Drechslerella stenobrocha DRE_06529 I 0.000
EPUS_01825 Endocarpon pusillum EPUS_01825 I 0.000
estExt_fgenesh1_pm.C_30735 Cryphonectria parasitica estExt_fgenesh1_pm.C_30735 I 0.000
EURHEDRAFT_411156 Aspergillus ruber EURHEDRAFT_411156 I 0.000
EV44_g4901 Erysiphe necator EV44_g4901 I 0.000
e_gw1.00710.230.1 Aspergillus carbonarius e_gw1.00710.230.1 I 0.000
F503_08759 Ophiostoma piceae uamh F503_08759 I 0.000
FFUJ_04663 Fusarium fujikuroi FFUJ_04663 I 0.000
fgenesh1_kg.C_scaffold_5000057 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_5000057 I 0.000
fgenesh1_pg.sca_18_chr2_1_0000729 Nectria haematococca fgenesh1_pg.sca_18_chr2_1_0000729 I 0.000
FGRRES_09832 Fusarium graminearum FGRRES_09832 I 0.000
FOXG_08221 Fusarium oxysporum FOXG_08221 I 0.000
FPSE_10348 Fusarium pseudograminearum FPSE_10348 I 0.000
FVEG_06450 Fusarium verticillioides FVEG_06450 I 0.000
G647_07711 Cladophialophora carrionii G647_07711 I 0.000
GGTG_08387 Gaeumannomyces graminis GGTG_08387 I 0.000
GLRG_02817 Colletotrichum graminicola GLRG_02817 I 0.000
GSTUM_00012070001 Tuber melanosporum GSTUM_00012070001 I 0.000
H072_3248 Dactylellina haptotyla H072_3248 I 0.000
H102_02845 Trichophyton rubrum H102_02845 I 0.000
H105_02864 Trichophyton soudanense H105_02864 I 0.000
HCBG_08448 Histoplasma capsulatum HCBG_08448 I 0.000
HMPREF1120_07358 Exophiala dermatitidis HMPREF1120_07358 I 0.000
HMPREF1541_04204 Cyphellophora europaea HMPREF1541_04204 I 0.000
HMPREF1624_06072 Sporothrix schenckii HMPREF1624_06072 I 0.000
LEMA_P075830.1 Leptosphaeria maculans LEMA_P075830.1 I 0.000
M7I_6846 Glarea lozoyensis M7I_6846 I 0.000
MAC_06402 Metarhizium acridum MAC_06402 I 0.000
MAJ_07228 Metarhizium majus MAJ_07228 I 0.000
MAM_03966 Metarhizium album MAM_03966 I 0.000
MANI_020708 Metarhizium anisopliae MANI_020708 I 0.000
MBM_06253 Marssonina brunnea MBM_06253 I 0.000
MBR_00309 Metarhizium brunneum MBR_00309 I 0.000
MCYG_02695 Microsporum canis MCYG_02695 I 0.000
MCYG_02695 Arthroderma otae MCYG_02695 I 0.000
MGU_01258 Metarhizium guizhouense MGU_01258 I 0.000
MGYG_08430 Microsporum gypseum MGYG_08430 I 0.000
MPH_02812 Macrophomina phaseolina MPH_02812 I 0.000
MYCTH_2299061 Myceliophthora thermophila MYCTH_2299061 I 0.000
NCU06399 Neurospora crassa NCU06399 D 0.000
NechaG76538 Fusarium solani NechaG76538 I 0.000
NEUTE1DRAFT_121024 Neurospora tetrasperma NEUTE1DRAFT_121024 I 0.000
OCS_02153 Ophiocordyceps sinensis OCS_02153 I 0.000
PAAG_01597 Paracoccidioides sp lutzii PAAG_01597 I 0.000
Pc12g13890 Penicillium chrysogenum Pc12g13890 I 0.000
PCH_Pc12g13890 Penicillium rubens PCH_Pc12g13890 I 0.000
PDE_01297 Penicillium oxalicum PDE_01297 I 0.000
PDIP_77620 Penicillium digitatum PDIP_77620 I 0.000
PEX1_065040 Penicillium expansum PEX1_065040 I 0.000
PFICI_05721 Pestalotiopsis fici PFICI_05721 I 0.000
PITC_048290 Penicillium italicum PITC_048290 I 0.000
PMAA_006130 Talaromyces marneffei PMAA_006130 I 0.000
PMAA_006130 Penicillium marneffei PMAA_006130 I 0.000
PODANS_3_4790 Podospora anserina PODANS_3_4790 I 0.000
PTRG_08316 Pyrenophora triticirepentis PTRG_08316 I 0.000
PTT_12277 Pyrenophora teres PTT_12277 I 0.000
PV04_09319 Capronia semiimmersa PV04_09319 I 0.000
PV05_00805 Exophiala xenobiotica PV05_00805 I 0.000
PV06_05138 Exophiala oligosperma PV06_05138 I 0.000
PV07_00488 Cladophialophora immunda PV07_00488 I 0.000
PV08_09059 Exophiala spinifera PV08_09059 I 0.000
PV09_01316 Verruconis gallopava PV09_01316 I 0.000
PV10_04959 Exophiala mesophila PV10_04959 I 0.000
PV11_02396 Exophiala sideris PV11_02396 I 0.000
S40285_06955 Stachybotrys chlorohalonata S40285_06955 I 0.000
S40288_05306 Stachybotrys chartarum S40288_05306 I 0.000
SAPIO_CDS7180 Scedosporium apiospermum SAPIO_CDS7180 I 0.000
scaffold_3-snap.528.1 Neurospora discreta scaffold_3-snap.528.1 I 0.000
SEPMUDRAFT_150066 Sphaerulina musiva SEPMUDRAFT_150066 I 0.000
SETTUDRAFT_96438 Setosphaeria turcica SETTUDRAFT_96438 I 0.000
SNOG_08036 Stagonospora nodorum SNOG_08036 I 0.000
SNOG_08036 Phaeosphaeria nodorum SNOG_08036 I 0.000
SPBR_00166 Sporothrix brasiliensis SPBR_00166 I 0.000
SS1G_13065 Sclerotinia sclerotiorum SS1G_13065 I 0.000
THITE_2115495 Thielavia terrestris THITE_2115495 I 0.000
TRIATDRAFT_168746 Trichoderma atroviride TRIATDRAFT_168746 I 0.000
TRIREDRAFT_41573 Trichoderma reesei TRIREDRAFT_41573 I 0.000
TRIVIDRAFT_192202 Trichoderma virens TRIVIDRAFT_192202 I 0.000
TRV_07458 Trichophyton verrucosum TRV_07458 I 0.000
TSTA_104870 Talaromyces stipitatus TSTA_104870 I 0.000
U727_0043258041 Penicillium solitum U727_0043258041 I 0.000
UCRNP2_2391 Neofusicoccum parvum UCRNP2_2391 I 0.000
UREG_02800 Uncinocarpus reesii UREG_02800 I 0.000
UV8b_314 Ustilaginoidea virens UV8b_314 I 0.000
VDAG_08933 Verticillium dahliae VDAG_08933 I 0.000
VHEMI03455 Torrubiella hemipterigena VHEMI03455 I 0.000
W97_04573 Coniosporium apollinis W97_04573 I 0.000
X797_002671 Metarhizium robertsii X797_002671 I 0.000
Z517_01506 Fonsecaea pedrosoi Z517_01506 I 0.000
Z518_05180 Rhinocladiella mackenziei Z518_05180 I 0.000
Z519_08509 Cladophialophora bantiana Z519_08509 I 0.000