ENSGMOG00000010829 (Gadus morhua)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSGMOG00000010829 T210645_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.862 0.925
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.862 0.925
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.862 0.925
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.862 0.925
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.862 0.925
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.827 0.792
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.827 0.792
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.827 0.792
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.827 0.792
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.827 0.792
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.826 0.792
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.826 0.792
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.826 0.792
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.826 0.792
so
M02117_2.00 		Drosophila melanogaster
NDATMYNNN
NNNRKATHN		 PBM
Weirauch et al.(2014)
pTH5690 		0.712 0.736
so
M03800_2.00 		Drosophila melanogaster
NYGATAYB
VRTATCRN		 SELEX
Nitta et al.(2015)
so_1 		0.712 0.736
so
M03801_2.00 		Drosophila melanogaster
YKATAYNNNYGATAY
RTATCRNNNRTATMR		 SELEX
Nitta et al.(2015)
so_2 		0.712 0.736
so
M03802_2.00 		Drosophila melanogaster
YGATACGTATCR
YGATACGTATCR		 SELEX
Nitta et al.(2015)
so_3 		0.712 0.736
so
M03803_2.00 		Drosophila melanogaster
RTATCRYGATAC
GTATCRYGATAY		 SELEX
Nitta et al.(2015)
so_4 		0.712 0.736
so
M06497_2.00 		Drosophila melanogaster
TGATAC
GTATCA		 B1H
Mathelier et al.(2014)
MA0246.1 		0.712 0.736
so
M06268_2.00 		Drosophila melanogaster
NRTGATA
TATCAYN		 B1H
Zhu et al.(2011)
So_Cell_FBgn0003460 		0.712 0.736
so
M06269_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
So_SOLEXA_FBgn0003460 		0.712 0.736
Six2
M00425_2.00 		Mus musculus
NNAYMYNN
NNRKRTNN		 PBM
Berger et al.(2008)
Six2_2307 		0.712 0.717
Six1
M00512_2.00 		Mus musculus
NNDATMYNNN
NNNRKATHNN		 PBM
Berger et al.(2008)
Six1_0935 		0.712 0.717
SIX1
M05094_2.00 		Homo sapiens
NNYGATACVB
VBGTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_HT-SELEX 		0.712 0.717
SIX1
M05096_2.00 		Homo sapiens
NNYGATAYVB
VBRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_HT-SELEX 		0.712 0.717
SIX2
M05285_2.00 		Homo sapiens
NNYGATACSB
VSGTATCRNN		 SELEX
Yin et al.(2017)
SIX2_eDBD_HT-SELEX 		0.712 0.717
SIX2
M05287_2.00 		Homo sapiens
NSGTRWCRYN
NRYGWYACSN		 SELEX
Yin et al.(2017)
SIX2_FL_HT-SELEX 		0.712 0.717
SIX1
M08130_2.00 		Homo sapiens
GWAACCTGANM
KNTCAGGTTWC		 ChIP-seq
Mathelier et al.(2014)
MA1118.1 		0.712 0.717
SIX2
M08133_2.00 		Homo sapiens
NNNTGWAACCTGAKMH
DKMTCAGGTTWCANNN		 ChIP-seq
Mathelier et al.(2014)
MA1119.1 		0.712 0.717
SIX1
M09142_2.00 		Homo sapiens
DGWAAYHTGABMYN
NRKVTCADRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX1_HUMAN.H11MO.0.A 		0.712 0.717
SIX2
M09157_2.00 		Homo sapiens
DGWAAYHHGABMH
DKVTCDDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_HUMAN.H11MO.0.A 		0.712 0.717
Six2
M09185_2.00 		Mus musculus
DGWAAYHYRABMYB
VRKVTYRDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_MOUSE.H11MO.0.A 		0.712 0.717
Six1
M09579_2.00 		Mus musculus
GWAAYHTGABMH
DKVTCADRTTWC		 Misc
Heinz et al.(2010)
Myoblast-Six1_GSE20150 		0.712 0.717
SIX1
M10684_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3_01 		0.712 0.717
SIX1
M10685_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3 		0.712 0.717
SIX1
M05095_2.00 		Homo sapiens
NNYGATABNB
VNVTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_Methyl-HT-SELEX 		0.712 0.717
SIX1
M05097_2.00 		Homo sapiens
NNYGATAYSB
VSRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_Methyl-HT-SELEX 		0.712 0.717
SIX2
M05286_2.00 		Homo sapiens
NBRTATCRNN
NNYGATAYVN		 SELEX
Yin et al.(2017)
SIX2_eDBD_Methyl-HT-SELEX 		0.712 0.717
SIX2
M05288_2.00 		Homo sapiens
VBRTAWCRNN
NNYGWTAYVB		 SELEX
Yin et al.(2017)
SIX2_FL_Methyl-HT-SELEX 		0.712 0.717
ceh-34
M00672_2.00 		Caenorhabditis elegans
NNNRDAWNNN
NNNWTHYNNN		 PBM
Narasimhan et al.(2015)
pTH9708 		0.634 0.604
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000011588 Homeodomain 188 240

Links

Other Homeodomain family TFs
Other Gadus morhua TFs

543 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003875 Aedes aegypti AAEL003875 I 0.000
AALB008691 Anopheles albimanus AALB008691 I 0.000
Aan_R009568 Calypte anna Aan_R009568 I 0.000
AARA006360 Anopheles arabiensis AARA006360 I 0.000
AATE004178 Anopheles atroparvus AATE004178 I 0.000
ACHR002282 Anopheles christyi ACHR002282 I 0.000
ACOC_0001203801 Angiostrongylus costaricensis ACOC_0001203801 I 0.000
ACUA022057 Anopheles culicifacies ACUA022057 I 0.000
ACYPI008586 Acyrthosiphon pisum ACYPI008586 I 0.000
ADAC004751 Anopheles darlingi ADAC004751 I 0.000
AFAF018385 Anopheles farauti AFAF018385 I 0.000
AFUN009419 Anopheles funestus AFUN009419 I 0.000
AGAP004438 Anopheles gambiae AGAP004438 I 0.000
Alligator_sinensis_CCG005388.1 Alligator sinensis Alligator_sinensis_CCG005388.1 I 0.000
ALUE_0000441701 Ascaris lumbricoides ALUE_0000441701 I 0.000
AMAM018005 Anopheles maculatus AMAM018005 I 0.000
AMEM016115 Anopheles merus AMEM016115 I 0.000
ANCCAN_00594 Ancylostoma caninum ANCCAN_00594 I 0.000
ANCCEY_05940 Ancylostoma ceylanicum ANCCEY_05940 I 0.000
ANCDUO_10264 Ancylostoma duodenale ANCDUO_10264 I 0.000
AQUA008497 Anopheles quadriannulatus AQUA008497 I 0.000
ASIM_0001129301 Anisakis simplex ASIM_0001129301 I 0.000
ASIS011603 Anopheles sinensis ASIS011603 I 0.000
ASTEI04919 Anopheles stephensi ASTEI04919 I 0.000
ASU_13052 Ascaris suum ASU_13052 I 0.000
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 I 0.000
BGLB011938 Biomphalaria glabrata BGLB011938 I 0.000
Bm6499 Brugia malayi Bm6499 I 0.000
BTMF_0000199301 Brugia timori BTMF_0000199301 I 0.000
BXY_0564300 Bursaphelenchus xylophilus BXY_0564300 I 0.000
CapteG112714 Capitella teleta CapteG112714 I 0.000
CBG20386 Caenorhabditis briggsae CBG20386 I 0.000
Cflo_10237--XP_624316.2_APIME Camponotus floridanus Cflo_10237--XP_624316.2_APIME I 0.000
CGI_10013026 Crassostrea gigas CGI_10013026 I 0.000
CLEC006997 Cimex lectularius CLEC006997 I 0.000
Cmyd_10006878 Chelonia mydas Cmyd_10006878 I 0.000
CPIJ003609 Culex quinquefasciatus CPIJ003609 I 0.000
CpipJ_CPIJ003609 Culex pipiens CpipJ_CPIJ003609 I 0.000
CRE28577 Caenorhabditis remanei CRE28577 I 0.000
D917_06327 Trichinella nativa D917_06327 I 0.000
DICVIV_09031 Dictyocaulus viviparus DICVIV_09031 I 0.000
DME_0000423301 Dracunculus medinensis DME_0000423301 I 0.000
EEL_0000517301 Elaeophora elaphi EEL_0000517301 I 0.000
EFV52785 Trichinella spiralis EFV52785 I 0.000
SP1 Anolis carolinensis ENSACAG00000000610 I 0.000
ENSAMEG00000012479 Ailuropoda melanoleuca ENSAMEG00000012479 I 0.000
ENSAPLG00000007170 Anas platyrhynchos ENSAPLG00000007170 I 0.000
SP1 Bos taurus ENSBTAG00000003021 I 0.000
ENSBTAP00000003929-D1 Bos grunniens ENSBTAP00000003929-D1 I 0.000
SP1 Canis familiaris ENSCAFG00000006950 I 0.000
SP1 Choloepus hoffmanni ENSCHOG00000001703 I 0.000
SP1 Callithrix jacchus ENSCJAG00000018553 I 0.000
SP1 Cavia porcellus ENSCPOG00000023095 I 0.000
ENSCSAG00000005498 Chlorocebus sabaeus ENSCSAG00000005498 I 0.000
SP1 Dasypus novemcinctus ENSDNOG00000017346 I 0.000
ENSECAG00000020197 Equus caballus ENSECAG00000020197 I 0.000
SP1 Erinaceus europaeus ENSEEUG00000013568 I 0.000
SP1 Felis catus ENSFCAG00000030741 I 0.000
SP1 Homo sapiens ENSG00000185591 D 0.000
ENSGALG00000028401 Gallus gallus ENSGALG00000028401 I 0.000
SP1 Gorilla gorilla ENSGGOG00000012593 I 0.000
SP1 Loxodonta africana ENSLAFG00000018043 I 0.000
ENSMEUG00000004493 Macropus eugenii ENSMEUG00000004493 I 0.000
SP1 Myotis lucifugus ENSMLUG00000017303 I 0.000
SP1 Macaca mulatta ENSMMUG00000020036 I 0.000
ENSMMUP00000026353 Macaca fascicularis ENSMMUP00000026353 I 0.000
Sp1 Mus musculus ENSMUSG00000001280 D 0.000
ENSNLEG00000017699 Nomascus leucogenys ENSNLEG00000017699 I 0.000
ENSOARG00000016514 Ovis aries ENSOARG00000016514 I 0.000
SP1 Oryctolagus cuniculus ENSOCUG00000004147 I 0.000
ENSONIG00000005121 Oreochromis niloticus ENSONIG00000005121 I 0.000
SP1 Ochotona princeps ENSOPRG00000000691 I 0.000
sp1 Oryzias latipes ENSORLG00000005195 I 0.000
ENSPANG00000018241 Papio anubis ENSPANG00000018241 I 0.000
SP1 Procavia capensis ENSPCAG00000004934 I 0.000
ENSPFOG00000007682 Poecilia formosa ENSPFOG00000007682 I 0.000
ENSPMAG00000000389 Petromyzon marinus ENSPMAG00000000389 I 0.000
ENSPMAG00000008063 Petromyzon marinus ENSPMAG00000008063 I 0.000
ENSPPYG00000004579 Pongo abelii ENSPPYG00000004579 I 0.000
ENSPSIG00000007013 Pelodiscus sinensis ENSPSIG00000007013 I 0.000
SP1 Pan troglodytes ENSPTRG00000005014 I 0.000
SP1 Pteropus vampyrus ENSPVAG00000012280 I 0.000
Sp1 Rattus norvegicus ENSRNOG00000014084 I 0.000
SP1 Sorex araneus ENSSARG00000013480 I 0.000
SP1 Sus scrofa ENSSSCG00000000272 I 0.000
ENSSTOG00000005928 Ictidomys tridecemlineatus ENSSTOG00000005928 I 0.000
SP1 Tupaia belangeri ENSTBEG00000010202 I 0.000
SP1 Taeniopygia guttata ENSTGUG00000015642 I 0.000
sp1 Tetraodon nigroviridis ENSTNIG00000007066 I 0.000
sp1 Takifugu rubripes ENSTRUG00000014305 I 0.000
ENSTSYG00000001068 Tarsius syrichta ENSTSYG00000001068 I 0.000
SP1 Tursiops truncatus ENSTTRG00000009591 I 0.000
ENSXMAG00000017829 Xiphophorus maculatus ENSXMAG00000017829 I 0.000
EVEC_0000041101 Enterobius vermicularis EVEC_0000041101 I 0.000
Gfo_R005030 Geospiza fortis Gfo_R005030 I 0.000
GPLIN_000570600 Globodera pallida GPLIN_000570600 I 0.000
GPUH_0001030801 Gongylonema pulchrum GPUH_0001030801 I 0.000
HCOI00688600 Haemonchus contortus HCOI00688600 I 0.000
HPBE_0001438901 Heligmosomoides bakeri HPBE_0001438901 I 0.000
HPLM_0000529101 Haemonchus placei HPLM_0000529101 I 0.000
L596_g19604 Steinernema carpocapsae L596_g19604 I 0.000
L889_g32073 Steinernema feltiae L889_g32073 I 0.000
L892_g17070 Steinernema scapterisci L892_g17070 I 0.000
L893_g2044 Steinernema glaseri L893_g2044 I 0.000
L898_g7955 Steinernema monticolum L898_g7955 I 0.000
LCUP000151 Lucilia cuprina LCUP000151 I 0.000
LDEC008345 Leptinotarsa decemlineata LDEC008345 I 0.000
LLOJ008095 Lutzomyia longipalpis LLOJ008095 I 0.000
LOAG_01580 Loa loa LOAG_01580 I 0.000
MhA1_Contig599.frz3.gene7 Meloidogyne hapla MhA1_Contig599.frz3.gene7 I 0.000
Myotis_brandtii_SP1_10022992 Myotis brandtii Myotis_brandtii_SP1_10022992 I 0.000
nAv.1.0.1.g06936 Acanthocheilonema viteae nAv.1.0.1.g06936 I 0.000
nDi.2.2.2.g02202 Dirofilaria immitis nDi.2.2.2.g02202 I 0.000
NECAME_13378 Necator americanus NECAME_13378 I 0.000
nLs.2.1.2.g07946 Litomosoides sigmodontis nLs.2.1.2.g07946 I 0.000
nOo.2.0.1.g04030 Onchocerca ochengi nOo.2.0.1.g04030 I 0.000
nOo.2.0.1.g09582 Onchocerca ochengi nOo.2.0.1.g09582 I 0.000
Ocbimv22023102m.g Octopus bimaculoides Ocbimv22023102m.g I 0.000
Ogr16979 Ophisaurus gracilis Ogr16979 I 0.000
Pvit_07435 Pogona vitticeps Pvit_07435 I 0.000
RSKR_0000732300 Rhabditophanes kr3021 RSKR_0000732300 I 0.000
RSKR_0000732400 Rhabditophanes kr3021 RSKR_0000732400 I 0.000
SBAD_0000755901 Soboliphyme baturini SBAD_0000755901 I 0.000
SMAR004952 Strigamia maritima SMAR004952 I 0.000
SMUV_0000007001 Syphacia muris SMUV_0000007001 I 0.000
SPU_009831 Strongylocentrotus purpuratus SPU_009831 I 0.000
SPU_009832 Strongylocentrotus purpuratus SPU_009832 I 0.000
sptf-3 Caenorhabditis elegans WBGene00012735 D 0.000
WBGene00237583 Onchocerca volvulus WBGene00237583 I 0.000
WBGene00237584 Onchocerca volvulus WBGene00237584 I 0.000