ENSLACG00000015041 (Latimeria chalumnae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSLACG00000015041 T210881_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 1.000
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 1.000
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 1.000
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 1.000
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.947
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.947
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.947
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.947
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.947
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.982
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.982
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.982
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.982
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.982
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.982
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.965
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000017069 Homeodomain 166 222

Links

Other Homeodomain family TFs
Other Latimeria chalumnae TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA009355 Anopheles arabiensis AARA009355 N 0.000
ACEP19659 Atta cephalotes ACEP19659 N 0.000
ACOM031370 Anopheles coluzzii ACOM031370 N 0.000
AEPI003098 Anopheles epiroticus AEPI003098 N 0.000
AEPI009274 Anopheles epiroticus AEPI009274 N 0.000
Alligator_sinensis_CCG013371.1 Alligator sinensis Alligator_sinensis_CCG013371.1 N 0.000
AMEC017016 Anopheles melas AMEC017016 N 0.000
AMEM000352 Anopheles merus AMEM000352 N 0.000
ANCCEY_14935 Ancylostoma ceylanicum ANCCEY_14935 N 0.000
AQUA001972 Anopheles quadriannulatus AQUA001972 N 0.000
BGLB001603 Biomphalaria glabrata BGLB001603 N 0.000
Bm11731 Brugia malayi Bm11731 N 0.000
Bm12319 Brugia malayi Bm12319 N 0.000
Brh_R001625 Buceros rhinoceros Brh_R001625 N 0.000
Brh_R008554 Buceros rhinoceros Brh_R008554 N 0.000
Cflo_00615--XP_001121679.1_APIME Camponotus floridanus Cflo_00615--XP_001121679.1_APIME N 0.000
Cflo_01443--XP_624772.1_APIME Camponotus floridanus Cflo_01443--XP_624772.1_APIME N 0.000
Cflo_16445--XP_624772.1_APIME Camponotus floridanus Cflo_16445--XP_624772.1_APIME N 0.000
CJA02603 Caenorhabditis japonica CJA02603 N 0.000
CLEC000374 Cimex lectularius CLEC000374 N 0.000
CLEC013286 Cimex lectularius CLEC013286 N 0.000
CPIJ012901 Culex quinquefasciatus CPIJ012901 N 0.000
CpipJ_CPIJ012901 Culex pipiens CpipJ_CPIJ012901 N 0.000
ENSAMEG00000007945 Ailuropoda melanoleuca ENSAMEG00000007945 N 0.000
KLF8 Bos taurus ENSBTAG00000005852 N 0.000
KLF6 Bos taurus ENSBTAG00000015188 N 0.000
ENSBTAG00000048085 Bos taurus ENSBTAG00000048085 N 0.000
KLF6 Callithrix jacchus ENSCJAG00000032379 I 0.000
klf4 Danio rerio ENSDARG00000079922 N 0.000
KLF1 Echinops telfairi ENSETEG00000002006 N 0.000
ENSFALG00000014565 Ficedula albicollis ENSFALG00000014565 N 0.000
KLF6 Homo sapiens ENSG00000067082 D 0.000
ENSGALG00000028383 Gallus gallus ENSGALG00000028383 N 0.000
ENSLOCG00000003791 Lepisosteus oculatus ENSLOCG00000003791 I 0.000
ENSMGAG00000006899 Meleagris gallopavo ENSMGAG00000006899 N 0.000
ENSOARG00000006771 Ovis aries ENSOARG00000006771 N 0.000
ENSOARG00000018838 Ovis aries ENSOARG00000018838 N 0.000
KLF8 Otolemur garnettii ENSOGAG00000000346 N 0.000
ENSOPRG00000000197 Ochotona princeps ENSOPRG00000000197 N 0.000
KLF5 Ochotona princeps ENSOPRG00000007620 N 0.000
KLF3 Procavia capensis ENSPCAG00000015573 N 0.000
ENSPFOG00000015451 Poecilia formosa ENSPFOG00000015451 I 0.000
KLF1 Pteropus vampyrus ENSPVAG00000014711 N 0.000
Klf7 Rattus norvegicus ENSRNOG00000012961 N 0.000
ENSSARG00000006987 Sorex araneus ENSSARG00000006987 N 0.000
ENSSHAG00000001834 Sarcophilus harrisii ENSSHAG00000001834 N 0.000
KLF8 Sus scrofa ENSSSCG00000012352 N 0.000
ENSSSCG00000012353 Sus scrofa ENSSSCG00000012353 N 0.000
KLF10 Tupaia belangeri ENSTBEG00000007597 N 0.000
KLF3 Tupaia belangeri ENSTBEG00000015639 N 0.000
ENSTBEG00000016090 Tupaia belangeri ENSTBEG00000016090 N 0.000
ENSTTRG00000010639 Tursiops truncatus ENSTTRG00000010639 N 0.000
KLF8 Vicugna pacos ENSVPAG00000009577 N 0.000
ENSXMAG00000007445 Xiphophorus maculatus ENSXMAG00000007445 N 0.000
estExt_fgenesh2_pg.C_20012 Branchiostoma floridae estExt_fgenesh2_pg.C_20012 N 0.000
GA25126 Drosophila pseudoobscura FBgn0246509 N 0.000
GA28679 Drosophila pseudoobscura FBgn0250039 N 0.000
GB45841 Apis mellifera GB45841 N 0.000
HDID_0000086901 Hymenolepis diminuta HDID_0000086901 N 0.000
HHAL000942-PA Halyomorpha halys HHAL000942-PA N 0.000
HHAL008173-PA Halyomorpha halys HHAL008173-PA N 0.000
Hsal_02965--XP_624772.1_APIME Harpegnathos saltator Hsal_02965--XP_624772.1_APIME N 0.000
ISCW004118 Ixodes scapularis ISCW004118 N 0.000
L798_04124 Zootermopsis nevadensis L798_04124 N 0.000
LDEC008394 Leptinotarsa decemlineata LDEC008394 N 0.000
LDEC010928 Leptinotarsa decemlineata LDEC010928 N 0.000
LDEC024398 Leptinotarsa decemlineata LDEC024398 N 0.000
LLOJ001749 Lutzomyia longipalpis LLOJ001749 N 0.000
MESCA001789 Megaselia scalaris MESCA001789 N 0.000
NV16825 Nasonia vitripennis NV16825 N 0.000
Ocbimv22007603m.g Octopus bimaculoides Ocbimv22007603m.g N 0.000
OESDEN_21938 Oesophagostomum dentatum OESDEN_21938 N 0.000
Ogr05338 Ophisaurus gracilis Ogr05338 N 0.000
PHUM399820 Pediculus humanus PHUM399820 N 0.000
PHUM483400 Pediculus humanus PHUM483400 N 0.000
PPAI010678 Phlebotomus papatasi PPAI010678 N 0.000
Pvit_06515 Pogona vitticeps Pvit_06515 N 0.000
RPRC011844 Rhodnius prolixus RPRC011844 N 0.000
Sakowv30032823m.g Saccoglossus kowalevskii Sakowv30032823m.g I 0.000
SBAD_0001243701 Soboliphyme baturini SBAD_0001243701 N 0.000
SINV23345 Solenopsis invicta SINV23345 N 0.000
SMAR000017 Strigamia maritima SMAR000017 N 0.000
SMTD_0002129001 Schistosoma mattheei SMTD_0002129001 N 0.000
SROB_0000810301 Schistosoma rodhaini SROB_0000810301 N 0.000
Tal_R002680 Tyto alba Tal_R002680 N 0.000
Tal_R005095 Tyto alba Tal_R005095 N 0.000
TC003611 Tribolium castaneum TC003611 N 0.000