IRX5 (Pteropus vampyrus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPVAG00000005731 T215219_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000005418 Homeodomain 110 169

Links

Other Homeodomain family TFs
Other Pteropus vampyrus TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC001 Arabidopsis thaliana AT1G01010 D 0.000
BGIOSGA009257 Oryza indica BGIOSGA009257 N 0.000
BGIOSGA014342 Oryza indica BGIOSGA014342 N 0.000
BGIOSGA016756 Oryza indica BGIOSGA016756 N 0.000
BGIOSGA023457 Oryza indica BGIOSGA023457 N 0.000
BRADI3G54817 Brachypodium distachyon BRADI3G54817 N 0.000
BRADI5G15587 Brachypodium distachyon BRADI5G15587 N 0.000
Eucgr.K03256 Eucalyptus grandis Eucgr.K03256 N 0.000
F775_08585 Aegilops tauschii F775_08585 N 0.000
F775_17109 Aegilops tauschii F775_17109 N 0.000
gene08112-v1.0-hybrid Fragaria vesca gene08112-v1.0-hybrid N 0.000
GLYMA03G32116 Glycine max GLYMA03G32116 N 0.000
GLYMA10G04350 Glycine max GLYMA10G04350 N 0.000
GLYMA13G18620 Glycine max GLYMA13G18620 N 0.000
GLYMA19G34881 Glycine max GLYMA19G34881 N 0.000
Gorai.001G178800 Gossypium raimondii Gorai.001G178800 N 0.000
Gorai.001G254300 Gossypium raimondii Gorai.001G254300 N 0.000
Gorai.007G147300 Gossypium raimondii Gorai.007G147300 N 0.000
GRMZM2G043813 Zea mays GRMZM2G043813 N 0.000
GRMZM2G062009 Zea mays GRMZM2G062009 N 0.000
GRMZM2G081930 Zea mays GRMZM2G081930 N 0.000
GRMZM2G140901 Zea mays GRMZM2G140901 I 0.000
GRMZM5G857701 Zea mays GRMZM5G857701 I 0.000
GSMUA_Achr11G00880_001 Musa acuminata GSMUA_Achr11G00880_001 N 0.000
GSMUA_Achr11G22760_001 Musa acuminata GSMUA_Achr11G22760_001 N 0.000
GSMUA_Achr1G10860_001 Musa acuminata GSMUA_Achr1G10860_001 N 0.000
GSMUA_Achr1G20530_001 Musa acuminata GSMUA_Achr1G20530_001 N 0.000
GSMUA_Achr5G18670_001 Musa acuminata GSMUA_Achr5G18670_001 N 0.000
GSMUA_Achr8G18980_001 Musa acuminata GSMUA_Achr8G18980_001 N 0.000
GSMUA_AchrUn_randomG02760_001 Musa acuminata GSMUA_AchrUn_randomG02760_001 N 0.000
LPERR02G30240 Leersia perrieri LPERR02G30240 I 0.000
MDP0000697030 Malus domestica MDP0000697030 N 0.000
mgf018312m Mimulus guttatus mgf018312m N 0.000
MLOC_12466 Hordeum vulgare MLOC_12466 N 0.000
MLOC_5165 Hordeum vulgare MLOC_5165 N 0.000
MTR_7g097090 Medicago truncatula MTR_7g097090 N 0.000
OB02G43380 Oryza brachyantha OB02G43380 N 0.000
OB04G25790 Oryza brachyantha OB04G25790 N 0.000
OBART02G36830 Oryza barthii OBART02G36830 N 0.000
OBART04G18700 Oryza barthii OBART04G18700 N 0.000
OBART06G24550 Oryza barthii OBART06G24550 N 0.000
OGLUM02G38020 Oryza glumaepatula OGLUM02G38020 I 0.000
OGLUM04G18750 Oryza glumaepatula OGLUM04G18750 N 0.000
OGLUM06G25850 Oryza glumaepatula OGLUM06G25850 N 0.000
OLONG_011232 Oryza longistaminata OLONG_011232 N 0.000
OMERI02G34720 Oryza meridionalis OMERI02G34720 N 0.000
OMERI06G24740 Oryza meridionalis OMERI06G24740 N 0.000
ONIVA02G35380 Oryza nivara ONIVA02G35380 N 0.000
ONIVA02G39640 Oryza nivara ONIVA02G39640 N 0.000
ONIVA04G01950 Oryza nivara ONIVA04G01950 N 0.000
OPUNC02G33860 Oryza punctata OPUNC02G33860 N 0.000
OPUNC04G16450 Oryza punctata OPUNC04G16450 N 0.000
OPUNC06G22270 Oryza punctata OPUNC06G22270 N 0.000
ORGLA02G0320500 Oryza glaberrima ORGLA02G0320500 N 0.000
ORGLA04G0158100 Oryza glaberrima ORGLA04G0158100 N 0.000
ORGLA06G0205600 Oryza glaberrima ORGLA06G0205600 N 0.000
ORUFI02G38340 Oryza rufipogon ORUFI02G38340 N 0.000
ORUFI04G20200 Oryza rufipogon ORUFI04G20200 N 0.000
ORUFI04G27160 Oryza rufipogon ORUFI04G27160 N 0.000
ORUFI06G26420 Oryza rufipogon ORUFI06G26420 N 0.000
OS02G0810900 Oryza sativa OS02G0810900 N 0.000
OS04G0515900 Oryza sativa OS04G0515900 N 0.000
OS06G0675600 Oryza sativa OS06G0675600 N 0.000
Pavir.Aa00144 Panicum virgatum Pavir.Aa00144 I 0.000
Pavir.Aa01668 Panicum virgatum Pavir.Aa01668 N 0.000
Pavir.Ab02337 Panicum virgatum Pavir.Ab02337 N 0.000
Pavir.Ga01251 Panicum virgatum Pavir.Ga01251 N 0.000
Pavir.Gb00655 Panicum virgatum Pavir.Gb00655 N 0.000
Pavir.Ib03261 Panicum virgatum Pavir.Ib03261 N 0.000
Pavir.J11268 Panicum virgatum Pavir.J11268 N 0.000
PDK_20s1301681g003 Phoenix dactylifera PDK_20s1301681g003 N 0.000
PDK_20s1648061g001 Phoenix dactylifera PDK_20s1648061g001 N 0.000
PGSC0003DMG400020147 Solanum tuberosum PGSC0003DMG400020147 N 0.000
PK19051.1 Cannabis sativa PK19051.1 N 0.000
Pm020580 Prunus mume Pm020580 N 0.000
PRUPE_ppa009628mg Prunus persica PRUPE_ppa009628mg N 0.000
Sb04g026440 Sorghum bicolor Sb04g026440 N 0.000
Sb04g036640 Sorghum bicolor Sb04g036640 I 0.000
Si010799m.g Setaria italica Si010799m.g N 0.000
Si017967m.g Setaria italica Si017967m.g I 0.000
Si018001m.g Setaria italica Si018001m.g N 0.000
Si036835m.g Setaria italica Si036835m.g N 0.000
Solyc06g008360.2 Solanum lycopersicum Solyc06g008360.2 N 0.000
Solyc09g025310.2 Solanum lycopersicum Solyc09g025310.2 N 0.000
TCM_003998 Theobroma cacao TCM_003998 N 0.000
Traes_2BL_D718E27A9 Triticum aestivum Traes_2BL_D718E27A9 N 0.000
Traes_6AL_B272C86BE Triticum aestivum Traes_6AL_B272C86BE N 0.000
Traes_6AL_B92597EA9 Triticum aestivum Traes_6AL_B92597EA9 N 0.000
Traes_6BL_99F790D57 Triticum aestivum Traes_6BL_99F790D57 N 0.000
Traes_6BL_D00F04562 Triticum aestivum Traes_6BL_D00F04562 I 0.000
Traes_6DL_1ABE78799 Triticum aestivum Traes_6DL_1ABE78799 N 0.000
Traes_6DL_8A1342D56 Triticum aestivum Traes_6DL_8A1342D56 N 0.000
TRIUR3_23299 Triticum urartu TRIUR3_23299 N 0.000
TRIUR3_32754 Triticum urartu TRIUR3_32754 N 0.000
TRIUR3_33179 Triticum urartu TRIUR3_33179 N 0.000