ENSSTOG00000028280 (Ictidomys tridecemlineatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSSTOG00000028280 T216095_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 1.000
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 1.000
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 1.000
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 1.000
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.947
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.947
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.947
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.947
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.947
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.982
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.982
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.982
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.982
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.982
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.982
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.965
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000020304 Homeodomain 117 173

Links

Other Homeodomain family TFs
Other Ictidomys tridecemlineatus TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HR83 Aedes aegypti AAEL007350 I 0.000
AALB009657 Anopheles albimanus AALB009657 I 0.000
AARA006703 Anopheles arabiensis AARA006703 I 0.000
AATE004130 Anopheles atroparvus AATE004130 I 0.000
ACAC_0001082701 Angiostrongylus cantonensis ACAC_0001082701 I 0.000
ACOC_0001282001 Angiostrongylus costaricensis ACOC_0001282001 I 0.000
ACYPI48102 Acyrthosiphon pisum ACYPI48102 I 0.000
AEPI004731 Anopheles epiroticus AEPI004731 I 0.000
AFUN005541 Anopheles funestus AFUN005541 I 0.000
AGAP002234 Anopheles gambiae AGAP002234 I 0.000
AMAM005986 Anopheles maculatus AMAM005986 I 0.000
AMEC011506 Anopheles melas AMEC011506 I 0.000
AMEM012481 Anopheles merus AMEM012481 I 0.000
AMIN000835 Anopheles minimus AMIN000835 I 0.000
AQUA004261 Anopheles quadriannulatus AQUA004261 I 0.000
ASTEI03427 Anopheles stephensi ASTEI03427 I 0.000
BGLB014038 Biomphalaria glabrata BGLB014038 N 0.000
BXY_1663900 Bursaphelenchus xylophilus BXY_1663900 N 0.000
CapteG177303 Capitella teleta CapteG177303 I 0.000
CBG09846 Caenorhabditis briggsae CBG09846 I 0.000
CBN10661 Caenorhabditis brenneri CBN10661 I 0.000
CPIJ015933 Culex quinquefasciatus CPIJ015933 I 0.000
CpipJ_CPIJ015933 Culex pipiens CpipJ_CPIJ015933 I 0.000
CRE25188 Caenorhabditis remanei CRE25188 I 0.000
Hr83 Drosophila melanogaster FBgn0037436 D 0.000
GA10225 Drosophila pseudoobscura FBgn0070284 I 0.000
GF16659 Drosophila ananassae FBgn0093680 I 0.000
GG13368 Drosophila erecta FBgn0105640 I 0.000
GH18089 Drosophila grimshawi FBgn0125557 I 0.000
GI24589 Drosophila mojavensis FBgn0147311 I 0.000
GL22067 Drosophila persimilis FBgn0159659 I 0.000
GM10889 Drosophila sechellia FBgn0165835 I 0.000
GD19868 Drosophila simulans FBgn0191357 I 0.000
GJ22654 Drosophila virilis FBgn0209758 I 0.000
GK13826 Drosophila willistoni FBgn0215834 I 0.000
GE10213 Drosophila yakuba FBgn0228087 I 0.000
HelroG148423 Helobdella robusta HelroG148423 I 0.000
HPLM_0002159101 Haemonchus placei HPLM_0002159101 I 0.000
Hsal_03084--XP_001121181.1_APIME Harpegnathos saltator Hsal_03084--XP_001121181.1_APIME I 0.000
ISCW008659 Ixodes scapularis ISCW008659 I 0.000
L596_g19535 Steinernema carpocapsae L596_g19535 N 0.000
L798_08383 Zootermopsis nevadensis L798_08383 I 0.000
L889_g32531 Steinernema feltiae L889_g32531 I 0.000
L892_g29081 Steinernema scapterisci L892_g29081 N 0.000
LCUP007875 Lucilia cuprina LCUP007875 I 0.000
LLOJ000718 Lutzomyia longipalpis LLOJ000718 I 0.000
LLOJ001302 Lutzomyia longipalpis LLOJ001302 I 0.000
LotgiG132791 Lottia gigantea LotgiG132791 I 0.000
MDOA009347 Musca domestica MDOA009347 I 0.000
NV10871 Nasonia vitripennis NV10871 I 0.000
Ocbimv22005486m.g Octopus bimaculoides Ocbimv22005486m.g I 0.000
PPAI010314 Phlebotomus papatasi PPAI010314 I 0.000
PTRK_0000986400 Parastrongyloides trichosuri PTRK_0000986400 N 0.000
RSKR_0000433000 Rhabditophanes kr3021 RSKR_0000433000 I 0.000
SMAR006023 Strigamia maritima SMAR006023 I 0.000
SMUV_0000977701 Syphacia muris SMUV_0000977701 N 0.000
SPAL_0001030000 Strongyloides papillosus SPAL_0001030000 N 0.000
SPU_012586 Strongylocentrotus purpuratus SPU_012586 I 0.000
SSTP_0000371600 Strongyloides stercoralis SSTP_0000371600 N 0.000
SVE_0494600 Strongyloides venezuelensis SVE_0494600 N 0.000
TC010460 Tribolium castaneum TC010460 I 0.000
tetur01g07700 Tetranychus urticae tetur01g07700 I 0.000
nhr-239 Caenorhabditis elegans WBGene00021848 I 0.000