irx2a (Takifugu rubripes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTRUG00000007607 T216679_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.866 0.982
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.866 0.982
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.866 0.982
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.866 0.982
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.866 0.982
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.866 0.982
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.814 0.912
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.814 0.912
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.814 0.912
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.781 0.895
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000018861 Homeodomain 142 201
ENSTRUP00000018862 Homeodomain 112 171
ENSTRUP00000018863 Homeodomain 112 171
ENSTRUP00000018864 Homeodomain 112 171
ENSTRUP00000018865 Homeodomain 112 171
ENSTRUP00000018866 Homeodomain 112 171

Links

Other Homeodomain family TFs
Other Takifugu rubripes TFs

380 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL014670 Aedes aegypti AAEL014670 I 0.000
AALB006731 Anopheles albimanus AALB006731 N 0.000
Aan_R003816 Calypte anna Aan_R003816 I 0.000
Aan_R006597 Calypte anna Aan_R006597 N 0.000
ACHR008952 Anopheles christyi ACHR008952 I 0.000
ACYPI001652 Acyrthosiphon pisum ACYPI001652 N 0.000
AEPI008594 Anopheles epiroticus AEPI008594 I 0.000
Afo_R014607 Aptenodytes forsteri Afo_R014607 N 0.000
AGAP000512 Anopheles gambiae AGAP000512 I 0.000
Alligator_sinensis_CCG016979.1 Alligator sinensis Alligator_sinensis_CCG016979.1 I 0.000
Alligator_sinensis_CCG020461.1 Alligator sinensis Alligator_sinensis_CCG020461.1 I 0.000
Aqu1.216869 Amphimedon queenslandica Aqu1.216869 I 0.000
AQUA008219 Anopheles quadriannulatus AQUA008219 I 0.000
BGIBMGA001129 Bombyx mori BGIBMGA001129 I 0.000
CBG02541 Caenorhabditis briggsae CBG02541 I 0.000
CBN00477 Caenorhabditis brenneri CBN00477 I 0.000
CBN16859 Caenorhabditis brenneri CBN16859 I 0.000
CLEC025393 Cimex lectularius CLEC025393 I 0.000
CPIJ013490 Culex quinquefasciatus CPIJ013490 I 0.000
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I 0.000
D915_00206 Fasciola hepatica D915_00206 I 0.000
D918_02241 Trichuris suis D918_02241 I 0.000
ECANG7_01760 Echinococcus canadensis ECANG7_01760 I 0.000
EFV53558 Trichinella spiralis EFV53558 I 0.000
ENSAMEG00000014183 Ailuropoda melanoleuca ENSAMEG00000014183 I 0.000
ENSAMXG00000013086 Astyanax mexicanus ENSAMXG00000013086 I 0.000
ENSAMXG00000013625 Astyanax mexicanus ENSAMXG00000013625 N 0.000
ENSAPLG00000016417 Anas platyrhynchos ENSAPLG00000016417 N 0.000
TEAD2 Bos taurus ENSBTAG00000016349 I 0.000
ENSBTAP00000021752-D1 Bos grunniens ENSBTAP00000021752-D1 N 0.000
TEAD3 Canis familiaris ENSCAFG00000001326 I 0.000
TEAD2 Canis familiaris ENSCAFG00000003698 I 0.000
TEAD1 Choloepus hoffmanni ENSCHOG00000001087 N 0.000
ENSCING00000019408 Ciona intestinalis ENSCING00000019408 I 0.000
TEAD2 Callithrix jacchus ENSCJAG00000000104 I 0.000
TEAD2 Cavia porcellus ENSCPOG00000011572 I 0.000
TEAD4 Cavia porcellus ENSCPOG00000020720 I 0.000
ENSCSAG00000002642 Chlorocebus sabaeus ENSCSAG00000002642 I 0.000
ENSCSAG00000011241 Chlorocebus sabaeus ENSCSAG00000011241 N 0.000
ENSCSAVG00000007634 Ciona savignyi ENSCSAVG00000007634 I 0.000
tead1a Danio rerio ENSDARG00000028159 I 0.000
tead1b Danio rerio ENSDARG00000059483 I 0.000
tead3a Danio rerio ENSDARG00000074321 N 0.000
Tead3 Dipodomys ordii ENSDORG00000010798 I 0.000
Tead1 Dipodomys ordii ENSDORG00000013529 N 0.000
TEAD3 Equus caballus ENSECAG00000015056 I 0.000
TEAD2 Equus caballus ENSECAG00000018010 I 0.000
ENSEEUG00000001836 Erinaceus europaeus ENSEEUG00000001836 I 0.000
TEAD2 Erinaceus europaeus ENSEEUG00000012244 I 0.000
TEAD4 Echinops telfairi ENSETEG00000017739 I 0.000
ENSFALG00000003635 Ficedula albicollis ENSFALG00000003635 I 0.000
TEAD2 Felis catus ENSFCAG00000001523 I 0.000
TEAD2 Homo sapiens ENSG00000074219 D 0.000
TEAD4 Homo sapiens ENSG00000197905 D 0.000
tead1a Gasterosteus aculeatus ENSGACG00000003385 I 0.000
tead3b Gasterosteus aculeatus ENSGACG00000005144 N 0.000
tead3a Gasterosteus aculeatus ENSGACG00000009758 I 0.000
tead1b Gasterosteus aculeatus ENSGACG00000015715 I 0.000
ENSGALG00000000953 Gallus gallus ENSGALG00000000953 I 0.000
TEAD4 Gorilla gorilla ENSGGOG00000006216 I 0.000
TEAD2 Gorilla gorilla ENSGGOG00000016367 I 0.000
ENSGMOG00000007916 Gadus morhua ENSGMOG00000007916 I 0.000
ENSGMOG00000010731 Gadus morhua ENSGMOG00000010731 I 0.000
ENSGMOG00000015271 Gadus morhua ENSGMOG00000015271 I 0.000
ENSLACG00000013349 Latimeria chalumnae ENSLACG00000013349 I 0.000
ENSLACG00000016444 Latimeria chalumnae ENSLACG00000016444 I 0.000
TEAD3 Loxodonta africana ENSLAFG00000014818 I 0.000
TEAD2 Loxodonta africana ENSLAFG00000016184 I 0.000
ENSLOCG00000009736 Lepisosteus oculatus ENSLOCG00000009736 I 0.000
ENSMGAG00000000674 Meleagris gallopavo ENSMGAG00000000674 N 0.000
TEAD4 Meleagris gallopavo ENSMGAG00000013910 I 0.000
TEAD3 Microcebus murinus ENSMICG00000000029 I 0.000
TEAD1 Microcebus murinus ENSMICG00000007178 I 0.000
TEAD2 Microcebus murinus ENSMICG00000009284 I 0.000
TEAD4 Myotis lucifugus ENSMLUG00000005310 N 0.000
TEAD4 Macaca mulatta ENSMMUG00000011299 I 0.000
TEAD2 Macaca mulatta ENSMMUG00000014791 I 0.000
TEAD3 Macaca mulatta ENSMMUG00000015909 I 0.000
ENSMMUP00000031528 Macaca fascicularis ENSMMUP00000031528 I 0.000
TEAD3 Monodelphis domestica ENSMODG00000013762 I 0.000
ENSMPUG00000002689 Mustela putorius furo ENSMPUG00000002689 I 0.000
Tead4 Mus musculus ENSMUSG00000030353 D 0.000
Tead2 Mus musculus ENSMUSG00000030796 D 0.000
Tead1 Mus musculus ENSMUSG00000055320 D 0.000
ENSNLEG00000005091 Nomascus leucogenys ENSNLEG00000005091 I 0.000
ENSNLEG00000008666 Nomascus leucogenys ENSNLEG00000008666 I 0.000
ENSOARG00000012881 Ovis aries ENSOARG00000012881 N 0.000
TEAD2 Oryctolagus cuniculus ENSOCUG00000008758 I 0.000
TEAD3 Otolemur garnettii ENSOGAG00000002943 I 0.000
TEAD4 Otolemur garnettii ENSOGAG00000005199 I 0.000
TEAD1 Otolemur garnettii ENSOGAG00000011380 N 0.000
ENSONIG00000005991 Oreochromis niloticus ENSONIG00000005991 N 0.000
ENSONIG00000011013 Oreochromis niloticus ENSONIG00000011013 I 0.000
ENSONIG00000012323 Oreochromis niloticus ENSONIG00000012323 I 0.000
ENSONIG00000014698 Oreochromis niloticus ENSONIG00000014698 I 0.000
TEAD4 Ochotona princeps ENSOPRG00000015460 N 0.000
TEAD4 Oryzias latipes ENSORLG00000002553 I 0.000
tead3b Oryzias latipes ENSORLG00000006370 N 0.000
tead1b Oryzias latipes ENSORLG00000007439 I 0.000
tead3a Oryzias latipes ENSORLG00000008361 I 0.000
ENSP00000349828 Macaca fascicularis ENSP00000349828 I 0.000
ENSP00000352926 Macaca fascicularis ENSP00000352926 N 0.000
ENSPANG00000018522 Papio anubis ENSPANG00000018522 I 0.000
ENSPANG00000023792 Papio anubis ENSPANG00000023792 I 0.000
TEAD2 Procavia capensis ENSPCAG00000003576 I 0.000
TEAD3 Procavia capensis ENSPCAG00000010213 I 0.000
TEAD4 Procavia capensis ENSPCAG00000013738 I 0.000
ENSPFOG00000003170 Poecilia formosa ENSPFOG00000003170 I 0.000
ENSPFOG00000009547 Poecilia formosa ENSPFOG00000009547 I 0.000
ENSPFOG00000011847 Poecilia formosa ENSPFOG00000011847 N 0.000
ENSPFOG00000013997 Poecilia formosa ENSPFOG00000013997 I 0.000
ENSPPYG00000010243 Pongo abelii ENSPPYG00000010243 I 0.000
ENSPSIG00000006176 Pelodiscus sinensis ENSPSIG00000006176 I 0.000
TEAD4 Pan troglodytes ENSPTRG00000004538 N 0.000
TEAD2 Pan troglodytes ENSPTRG00000011290 I 0.000
TEAD3 Pan troglodytes ENSPTRG00000018086 I 0.000
TEAD3 Pteropus vampyrus ENSPVAG00000002764 I 0.000
TEAD2 Pteropus vampyrus ENSPVAG00000010945 I 0.000
Tead2 Rattus norvegicus ENSRNOG00000020695 I 0.000
ENSSARG00000008050 Sorex araneus ENSSARG00000008050 N 0.000
ENSSHAG00000015930 Sarcophilus harrisii ENSSHAG00000015930 I 0.000
TEAD2 Sus scrofa ENSSSCG00000025568 I 0.000
ENSSTOG00000012695 Ictidomys tridecemlineatus ENSSTOG00000012695 I 0.000
TEAD3 Taeniopygia guttata ENSTGUG00000001691 I 0.000
TEAD1 Taeniopygia guttata ENSTGUG00000015995 N 0.000
tead1a Tetraodon nigroviridis ENSTNIG00000008857 I 0.000
ENSTNIG00000008857_CONSTRUCT PBM CONSTRUCTS ENSTNIG00000008857_CONSTRUCT D 0.000
tead1b Tetraodon nigroviridis ENSTNIG00000009360 N 0.000
tead3b Tetraodon nigroviridis ENSTNIG00000018296 N 0.000
tead1a Takifugu rubripes ENSTRUG00000005940 I 0.000
tead3a Takifugu rubripes ENSTRUG00000011546 I 0.000
TEAD4 Takifugu rubripes ENSTRUG00000016489 I 0.000
tead3b Takifugu rubripes ENSTRUG00000018177 I 0.000
ENSTSYG00000006048 Tarsius syrichta ENSTSYG00000006048 I 0.000
TEAD2 Tursiops truncatus ENSTTRG00000005361 I 0.000
TEAD4 Tursiops truncatus ENSTTRG00000007774 N 0.000
TEAD3 Tursiops truncatus ENSTTRG00000009434 I 0.000
TEAD1 Vicugna pacos ENSVPAG00000005288 N 0.000
ENSVPAG00000012068 Vicugna pacos ENSVPAG00000012068 N 0.000
ENSXMAG00000008189 Xiphophorus maculatus ENSXMAG00000008189 I 0.000
ENSXMAG00000015423 Xiphophorus maculatus ENSXMAG00000015423 I 0.000
ENSXMAG00000018099 Xiphophorus maculatus ENSXMAG00000018099 N 0.000
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I 0.000
sd Drosophila melanogaster FBgn0003345 D 0.000
GA21152 Drosophila pseudoobscura FBgn0081140 I 0.000
GG17919 Drosophila erecta FBgn0110139 I 0.000
Gfo_R013616 Geospiza fortis Gfo_R013616 N 0.000
HelroG146479 Helobdella robusta HelroG146479 I 0.000
ISCW001055 Ixodes scapularis ISCW001055 N 0.000
L798_06691 Zootermopsis nevadensis L798_06691 N 0.000
Myotis_brandtii_TEAD2_10017641 Myotis brandtii Myotis_brandtii_TEAD2_10017641 I 0.000
Myotis_brandtii_TEAD4_10028679 Myotis brandtii Myotis_brandtii_TEAD4_10028679 I 0.000
NEMVEDRAFT_v1g86806 Nematostella vectensis NEMVEDRAFT_v1g86806 I 0.000
PHUM251000 Pediculus humanus PHUM251000 N 0.000
PPAI001408 Phlebotomus papatasi PPAI001408 I 0.000
Pvit_05988 Pogona vitticeps Pvit_05988 I 0.000
SMAR011013 Strigamia maritima SMAR011013 I 0.000
SMAR013465 Strigamia maritima SMAR013465 I 0.000
SMTD_0001953201 Schistosoma mattheei SMTD_0001953201 I 0.000
SMU15036748 Schmidtea mediterranea SMU15036748 N 0.000
SROB_0002407501 Schistosoma rodhaini SROB_0002407501 I 0.000
TMUE_s0021001300 Trichuris muris TMUE_s0021001300 N 0.000
TsM_000210300 Taenia solium TsM_000210300 I 0.000
egl-44 Caenorhabditis elegans WBGene00001208 I 0.000
tead1 Xenopus tropicalis XB-GENE-5909149 I 0.000
tead4 Xenopus tropicalis XB-GENE-956369 I 0.000
tead4.S Xenopus laevis XB-GENE-956372 N 0.000
XP_002943057 Xenopus tropicalis XP_002943057 I 0.000