GA10434 (Drosophila pseudoobscura)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 FBgn0070491 T217538_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.867 1.000
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.867 1.000
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.858 0.947
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.858 0.947
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.858 0.947
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.824 0.895
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.806 0.877
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.806 0.877
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.806 0.877
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.806 0.877
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.806 0.877
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0275021 Homeodomain 231 290

Links

Other Homeodomain family TFs
Other Drosophila pseudoobscura TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10000740 Chelonia mydas Cmyd_10000740 N 0.000
Cmyd_10001487 Chelonia mydas Cmyd_10001487 N 0.000
Cmyd_10001489 Chelonia mydas Cmyd_10001489 N 0.000
Cmyd_10001989 Chelonia mydas Cmyd_10001989 N 0.000
Cmyd_10002130 Chelonia mydas Cmyd_10002130 N 0.000
Cmyd_10003126 Chelonia mydas Cmyd_10003126 N 0.000
Cmyd_10003172 Chelonia mydas Cmyd_10003172 N 0.000
Cmyd_10003439 Chelonia mydas Cmyd_10003439 N 0.000
Cmyd_10003504 Chelonia mydas Cmyd_10003504 N 0.000
Cmyd_10003577 Chelonia mydas Cmyd_10003577 N 0.000
Cmyd_10003600 Chelonia mydas Cmyd_10003600 N 0.000
Cmyd_10003917 Chelonia mydas Cmyd_10003917 N 0.000
Cmyd_10003938 Chelonia mydas Cmyd_10003938 N 0.000
Cmyd_10004410 Chelonia mydas Cmyd_10004410 N 0.000
Cmyd_10004486 Chelonia mydas Cmyd_10004486 N 0.000
Cmyd_10004639 Chelonia mydas Cmyd_10004639 N 0.000
Cmyd_10004760 Chelonia mydas Cmyd_10004760 N 0.000
Cmyd_10004763 Chelonia mydas Cmyd_10004763 N 0.000
Cmyd_10004862 Chelonia mydas Cmyd_10004862 N 0.000
Cmyd_10005354 Chelonia mydas Cmyd_10005354 N 0.000
Cmyd_10005732 Chelonia mydas Cmyd_10005732 N 0.000
Cmyd_10006184 Chelonia mydas Cmyd_10006184 N 0.000
Cmyd_10006364 Chelonia mydas Cmyd_10006364 N 0.000
Cmyd_10006621 Chelonia mydas Cmyd_10006621 N 0.000
Cmyd_10006667 Chelonia mydas Cmyd_10006667 N 0.000
Cmyd_10006722 Chelonia mydas Cmyd_10006722 N 0.000
Cmyd_10006724 Chelonia mydas Cmyd_10006724 N 0.000
Cmyd_10006726 Chelonia mydas Cmyd_10006726 N 0.000
Cmyd_10007286 Chelonia mydas Cmyd_10007286 N 0.000
Cmyd_10007685 Chelonia mydas Cmyd_10007685 N 0.000
Cmyd_10007900 Chelonia mydas Cmyd_10007900 N 0.000
Cmyd_10008051 Chelonia mydas Cmyd_10008051 N 0.000
Cmyd_10008169 Chelonia mydas Cmyd_10008169 N 0.000
Cmyd_10008315 Chelonia mydas Cmyd_10008315 N 0.000
Cmyd_10008441 Chelonia mydas Cmyd_10008441 N 0.000
Cmyd_10008565 Chelonia mydas Cmyd_10008565 N 0.000
Cmyd_10008649 Chelonia mydas Cmyd_10008649 N 0.000
Cmyd_10008661 Chelonia mydas Cmyd_10008661 N 0.000
Cmyd_10008683 Chelonia mydas Cmyd_10008683 N 0.000
Cmyd_10008690 Chelonia mydas Cmyd_10008690 N 0.000
Cmyd_10008722 Chelonia mydas Cmyd_10008722 N 0.000
Cmyd_10009235 Chelonia mydas Cmyd_10009235 N 0.000
Cmyd_10009304 Chelonia mydas Cmyd_10009304 N 0.000
Cmyd_10009310 Chelonia mydas Cmyd_10009310 N 0.000
Cmyd_10009391 Chelonia mydas Cmyd_10009391 N 0.000
Cmyd_10009634 Chelonia mydas Cmyd_10009634 N 0.000
Cmyd_10009643 Chelonia mydas Cmyd_10009643 N 0.000
Cmyd_10009827 Chelonia mydas Cmyd_10009827 N 0.000
Cmyd_10010235 Chelonia mydas Cmyd_10010235 N 0.000
Cmyd_10010344 Chelonia mydas Cmyd_10010344 N 0.000
Cmyd_10010768 Chelonia mydas Cmyd_10010768 N 0.000
Cmyd_10011031 Chelonia mydas Cmyd_10011031 N 0.000
Cmyd_10011123 Chelonia mydas Cmyd_10011123 N 0.000
Cmyd_10011536 Chelonia mydas Cmyd_10011536 N 0.000
Cmyd_10011542 Chelonia mydas Cmyd_10011542 N 0.000
Cmyd_10011607 Chelonia mydas Cmyd_10011607 N 0.000
Cmyd_10011896 Chelonia mydas Cmyd_10011896 N 0.000
Cmyd_10012053 Chelonia mydas Cmyd_10012053 N 0.000
Cmyd_10012141 Chelonia mydas Cmyd_10012141 N 0.000
Cmyd_10012194 Chelonia mydas Cmyd_10012194 N 0.000
Cmyd_10012220 Chelonia mydas Cmyd_10012220 N 0.000
Cmyd_10012472 Chelonia mydas Cmyd_10012472 N 0.000
Cmyd_10012482 Chelonia mydas Cmyd_10012482 N 0.000
Cmyd_10012972 Chelonia mydas Cmyd_10012972 N 0.000
Cmyd_10013046 Chelonia mydas Cmyd_10013046 N 0.000
Cmyd_10013718 Chelonia mydas Cmyd_10013718 N 0.000
Cmyd_10014022 Chelonia mydas Cmyd_10014022 N 0.000
Cmyd_10014341 Chelonia mydas Cmyd_10014341 N 0.000
Cmyd_10014427 Chelonia mydas Cmyd_10014427 N 0.000
Cmyd_10014586 Chelonia mydas Cmyd_10014586 N 0.000
Cmyd_10014771 Chelonia mydas Cmyd_10014771 N 0.000
Cmyd_10014780 Chelonia mydas Cmyd_10014780 N 0.000
Cmyd_10014894 Chelonia mydas Cmyd_10014894 N 0.000
Cmyd_10014903 Chelonia mydas Cmyd_10014903 N 0.000
Cmyd_10014934 Chelonia mydas Cmyd_10014934 N 0.000
Cmyd_10015316 Chelonia mydas Cmyd_10015316 N 0.000
Cmyd_10016005 Chelonia mydas Cmyd_10016005 N 0.000
Cmyd_10016324 Chelonia mydas Cmyd_10016324 N 0.000
Cmyd_10016549 Chelonia mydas Cmyd_10016549 N 0.000
Cmyd_10016788 Chelonia mydas Cmyd_10016788 N 0.000
Cmyd_10016810 Chelonia mydas Cmyd_10016810 N 0.000
Cmyd_10016912 Chelonia mydas Cmyd_10016912 N 0.000
Cmyd_10016989 Chelonia mydas Cmyd_10016989 N 0.000
Cmyd_10017127 Chelonia mydas Cmyd_10017127 N 0.000
Cmyd_10017203 Chelonia mydas Cmyd_10017203 N 0.000
Cmyd_10017310 Chelonia mydas Cmyd_10017310 N 0.000
Cmyd_10017691 Chelonia mydas Cmyd_10017691 N 0.000
Cmyd_10017906 Chelonia mydas Cmyd_10017906 N 0.000
Cmyd_10017938 Chelonia mydas Cmyd_10017938 N 0.000
Cmyd_10017985 Chelonia mydas Cmyd_10017985 N 0.000