GSTUM_00011138001 (Tuber melanosporum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSTUM_00011138001 T219273_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.677 0.544
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.677 0.544
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.677 0.544
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.677 0.544
yox1
M02174_2.00 		Schizosaccharomyces pombe
NNHHATDDNN
NNHHATDDNN		 PBM
Weirauch et al.(2014)
pTH6057 		0.660 0.456
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.651 0.491
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.651 0.491
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.651 0.491
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.651 0.491
ATEG_04171
M02059_2.00 		Aspergillus terreus
BWWATKRNNN
NNNYMATWWV		 PBM
Weirauch et al.(2014)
pTH5871 		0.642 0.596
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAZ85970 Homeodomain 43 99

Links

Other Homeodomain family TFs
Other Tuber melanosporum TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA009202 Oryza indica BGIOSGA009202 N 0.000
Bo9g001070 Brassica oleracea Bo9g001070 N 0.000
Cucsa.140430 Cucumis sativus Cucsa.140430 N 0.000
F775_20324 Aegilops tauschii F775_20324 N 0.000
GLYMA14G09231 Glycine max GLYMA14G09231 I 0.000
GRMZM2G316758 Zea mays GRMZM2G316758 N 0.000
GSMUA_Achr9G11300_001 Musa acuminata GSMUA_Achr9G11300_001 N 0.000
Lus10018724.g Linum usitatissimum Lus10018724.g N 0.000
Lus10036286.g Linum usitatissimum Lus10036286.g N 0.000
MDP0000293310 Malus domestica MDP0000293310 N 0.000
mgf017216m Mimulus guttatus mgf017216m N 0.000
mgf025738m Mimulus guttatus mgf025738m N 0.000
OB02G42630 Oryza brachyantha OB02G42630 N 0.000
OB12G25120 Oryza brachyantha OB12G25120 N 0.000
OBART02G35840 Oryza barthii OBART02G35840 N 0.000
OBART10G18190 Oryza barthii OBART10G18190 I 0.000
OGLUM03G27730 Oryza glumaepatula OGLUM03G27730 I 0.000
OGLUM05G02640 Oryza glumaepatula OGLUM05G02640 I 0.000
OLONG_003839 Oryza longistaminata OLONG_003839 N 0.000
OLONG_008235 Oryza longistaminata OLONG_008235 N 0.000
OLONG_013198 Oryza longistaminata OLONG_013198 I 0.000
OMERI05G02570 Oryza meridionalis OMERI05G02570 I 0.000
OMERI10G14830 Oryza meridionalis OMERI10G14830 N 0.000
ONIVA10G20730 Oryza nivara ONIVA10G20730 N 0.000
OPUNC01G09800 Oryza punctata OPUNC01G09800 N 0.000
OPUNC09G08950 Oryza punctata OPUNC09G08950 N 0.000
OPUNC10G16560 Oryza punctata OPUNC10G16560 I 0.000
ORGLA05G0025000 Oryza glaberrima ORGLA05G0025000 N 0.000
ORUFI10G19390 Oryza rufipogon ORUFI10G19390 N 0.000
Pavir.Ca01237 Panicum virgatum Pavir.Ca01237 I 0.000
Pavir.J12143 Panicum virgatum Pavir.J12143 I 0.000
PDK_20s1361701g002 Phoenix dactylifera PDK_20s1361701g002 N 0.000
Pm005303 Prunus mume Pm005303 N 0.000
Traes_6AS_E0A257EEA Triticum aestivum Traes_6AS_E0A257EEA N 0.000
TRIUR3_21181 Triticum urartu TRIUR3_21181 N 0.000
TRIUR3_25332 Triticum urartu TRIUR3_25332 N 0.000
TRIUR3_26354 Triticum urartu TRIUR3_26354 N 0.000
TRIUR3_33471 Triticum urartu TRIUR3_33471 N 0.000