NEMVEDRAFT_v1g29874 (Nematostella vectensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 NEMVEDRAFT_v1g29874 T221045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.809 0.893
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.796 0.875
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.796 0.875
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.796 0.875
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.796 0.875
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.796 0.875
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.796 0.875
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.788 0.839
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.788 0.839
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.788 0.839
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.788 0.839
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.788 0.839
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.788 0.839
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.765 0.857
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO41982 Homeodomain 1 59

Links

Other Homeodomain family TFs
Other Nematostella vectensis TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Brh_R000963 Buceros rhinoceros Brh_R000963 I 0.000
Cmyd_10008594 Chelonia mydas Cmyd_10008594 I 0.000
ENSAMEG00000018236 Ailuropoda melanoleuca ENSAMEG00000018236 I 0.000
ENSAMXG00000004647 Astyanax mexicanus ENSAMXG00000004647 I 0.000
REL Bos taurus ENSBTAG00000015386 I 0.000
REL Canis familiaris ENSCAFG00000002981 I 0.000
ENSCHOG00000004207 Choloepus hoffmanni ENSCHOG00000004207 I 0.000
REL Choloepus hoffmanni ENSCHOG00000010935 I 0.000
REL Callithrix jacchus ENSCJAG00000008975 I 0.000
rel Danio rerio ENSDARG00000055276 I 0.000
REL Equus caballus ENSECAG00000003277 I 0.000
ENSETEG00000002607 Echinops telfairi ENSETEG00000002607 I 0.000
ENSFALG00000011066 Ficedula albicollis ENSFALG00000011066 I 0.000
REL Felis catus ENSFCAG00000008018 I 0.000
REL Homo sapiens ENSG00000162924 D 0.000
RELA Homo sapiens ENSG00000173039 D 0.000
REL Gallus gallus ENSGALG00000007845 I 0.000
REL Gorilla gorilla ENSGGOG00000024826 I 0.000
ENSGMOG00000018800 Gadus morhua ENSGMOG00000018800 I 0.000
ENSLACG00000008544 Latimeria chalumnae ENSLACG00000008544 I 0.000
ENSLOCG00000016127 Lepisosteus oculatus ENSLOCG00000016127 I 0.000
REL Meleagris gallopavo ENSMGAG00000001721 I 0.000
REL Microcebus murinus ENSMICG00000010062 I 0.000
REL Myotis lucifugus ENSMLUG00000007454 I 0.000
REL Macaca mulatta ENSMMUG00000010834 I 0.000
ENSMMUP00000014199 Macaca fascicularis ENSMMUP00000014199 I 0.000
REL Monodelphis domestica ENSMODG00000002172 I 0.000
ENSMPUG00000005180 Mustela putorius furo ENSMPUG00000005180 I 0.000
Rel Mus musculus ENSMUSG00000020275 D 0.000
ENSNLEG00000009519 Nomascus leucogenys ENSNLEG00000009519 I 0.000
REL Ornithorhynchus anatinus ENSOANG00000012405 I 0.000
ENSOARG00000001457 Ovis aries ENSOARG00000001457 I 0.000
REL Oryctolagus cuniculus ENSOCUG00000004968 I 0.000
REL Otolemur garnettii ENSOGAG00000013722 I 0.000
ENSONIG00000002983 Oreochromis niloticus ENSONIG00000002983 I 0.000
ENSP00000295025-D1 Bos grunniens ENSP00000295025-D1 I 0.000
ENSPANG00000006148 Papio anubis ENSPANG00000006148 I 0.000
ENSPFOG00000013038 Poecilia formosa ENSPFOG00000013038 I 0.000
ENSPPYG00000012391 Pongo abelii ENSPPYG00000012391 I 0.000
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I 0.000
REL Pan troglodytes ENSPTRG00000011949 I 0.000
REL Pteropus vampyrus ENSPVAG00000000364 I 0.000
Rel Rattus norvegicus ENSRNOG00000054437 I 0.000
REL Sus scrofa ENSSSCG00000008388 I 0.000
ENSSTOG00000005785 Ictidomys tridecemlineatus ENSSTOG00000005785 I 0.000
RELA Tupaia belangeri ENSTBEG00000004751 I 0.000
ENSTNIG00000017107 Tetraodon nigroviridis ENSTNIG00000017107 N 0.000
ENSTRUG00000006394 Takifugu rubripes ENSTRUG00000006394 I 0.000
ENSTSYG00000012918 Tarsius syrichta ENSTSYG00000012918 I 0.000
REL Vicugna pacos ENSVPAG00000000493 I 0.000
ENSXMAG00000007379 Xiphophorus maculatus ENSXMAG00000007379 I 0.000
Myotis_brandtii_REL_10034307 Myotis brandtii Myotis_brandtii_REL_10034307 I 0.000
Pvit_04537 Pogona vitticeps Pvit_04537 I 0.000
Tal_R011178 Tyto alba Tal_R011178 I 0.000
rel.S Xenopus laevis XB-GENE-17342653 I 0.000
rel Xenopus tropicalis XB-GENE-993262 I 0.000
rel.L Xenopus laevis XB-GENE-993266 I 0.000