CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g47235
(
Nematostella vectensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
NEMVEDRAFT_v1g47235
T221052_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q0N4H7_NEMVE
M02164_2.00
Nematostella vectensis
NNDAYNDNNN
NNNHNRTHNN
PBM
Weirauch et al.(2014)
pTH6472
0.849
0.947
NEMVEDRAFT_v1g114268
M02145_2.00
Nematostella vectensis
WTAATBGRT
AYCVATTAW
PBM
Weirauch et al.(2014)
pTH6514
0.842
0.895
Q0N4H2_NEMVE
M02163_2.00
Nematostella vectensis
TAATYRVT
ABYRATTA
PBM
Weirauch et al.(2014)
pTH6303
0.720
0.579
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO38253
Homeodomain
2
58
KPRRSFFSADQVNQLERVFAAHQYVSANERAEIAETLNMSDDQVKIWFQNRRMKRKR
Links
Other
Homeodomain
family TFs
Other
Nematostella vectensis
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MGG_00587
Magnaporthe oryzae
MGG_00587
N
S40285_06361
Stachybotrys chlorohalonata
S40285_06361
N
UCRPA7_5196
Togninia minima
UCRPA7_5196
N