PLEOSDRAFT_1075550 (Pleurotus ostreatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PLEOSDRAFT_1075550 T222431_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.656 0.386
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.656 0.386
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.656 0.386
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.656 0.386
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.632 0.368
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.632 0.368
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.632 0.368
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.632 0.368
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDQ31497 Homeodomain 31 87

Links

Other Homeodomain family TFs
Other Pleurotus ostreatus TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_036480 Albugo laibachii ALNC14_036480 N 0.000
ALNC14_092860 Albugo laibachii ALNC14_092860 N 0.000
ALNC14_110220 Albugo laibachii ALNC14_110220 N 0.000
e_gw1.457.7.1 Phytophthora capsici e_gw1.457.7.1 N 0.000
F443_08033 Phytophthora parasitica F443_08033 N 0.000
F443_15764 Phytophthora parasitica F443_15764 N 0.000
F443_15765 Phytophthora parasitica F443_15765 N 0.000
F443_15766 Phytophthora parasitica F443_15766 N 0.000
fgenesh1_pg.C_scaffold_17000111 Phytophthora capsici fgenesh1_pg.C_scaffold_17000111 N 0.000
fgenesh1_pm.C_scaffold_10000249 Phytophthora capsici fgenesh1_pm.C_scaffold_10000249 N 0.000
fgenesh_scip_prom.28083.12007 Phytophthora lateralis fgenesh_scip_prom.28083.12007 N 0.000
fgenesh_scip_prom.28083.5336 Phytophthora lateralis fgenesh_scip_prom.28083.5336 N 0.000
fgenesh_scip_prom.46568.6540 Phytophthora kernoviae fgenesh_scip_prom.46568.6540 N 0.000
fgenesh_scip_prom.46568.9529 Phytophthora kernoviae fgenesh_scip_prom.46568.9529 N 0.000
maker-pag1_scaffold_526-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_526-fgenesh-gene-0.3 N 0.000
maker-pag1_scaffold_539-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_539-snap-gene-0.8 N 0.000
maker-pag1_scaffold_785-snap-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_785-snap-gene-0.4 N 0.000
maker-par_contig_2316-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_2316-fgenesh-gene-0.0 N 0.000
maker-pir_contig_1338-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1338-fgenesh-gene-0.2 N 0.000
maker-pir_contig_4474-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_4474-fgenesh-gene-0.0 N 0.000
maker-pir_contig_636-snap-gene-0.12 Pythium irregulare maker-pir_contig_636-snap-gene-0.12 N 0.000
maker-piw_contig_10342-snap-gene-0.1 Pythium iwayamai maker-piw_contig_10342-snap-gene-0.1 N 0.000
maker-pve_contig_1305-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_1305-fgenesh-gene-0.0 N 0.000
maker-pve_contig_563-fgenesh-gene-0.8 Pythium vexans maker-pve_contig_563-fgenesh-gene-0.8 N 0.000
Phyra75440 Phytophthora ramorum Phyra75440 N 0.000
Phyra85808 Phytophthora ramorum Phyra85808 N 0.000
Physo138014 Phytophthora sojae Physo138014 N 0.000
Physo142188 Phytophthora sojae Physo142188 N 0.000
Physo142191 Phytophthora sojae Physo142191 N 0.000
Physo142192 Phytophthora sojae Physo142192 N 0.000
PITG_04694 Phytophthora infestans PITG_04694 N 0.000
PITG_04700 Phytophthora infestans PITG_04700 N 0.000
PITG_20387 Phytophthora infestans PITG_20387 N 0.000
PYU1_G007486 Pythium ultimum PYU1_G007486 N 0.000
PYU1_G007487 Pythium ultimum PYU1_G007487 N 0.000
SPRG_11849 Saprolegnia parasitica SPRG_11849 N 0.000