SELMODRAFT_419270 (Selaginella moellendorffii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SELMODRAFT_419270 T223102_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.612 0.421
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.612 0.421
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.612 0.421
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ19509 Homeodomain 62 122

Links

Other Homeodomain family TFs
Other Selaginella moellendorffii TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC087 Arabidopsis thaliana AT5G18270 D 0.000
BGIOSGA010816 Oryza indica BGIOSGA010816 N 0.000
Bo2g015440 Brassica oleracea Bo2g015440 I 0.000
Bo3g013050 Brassica oleracea Bo3g013050 I 0.000
Bostr.26527s0381 Boechera stricta Bostr.26527s0381 I 0.000
Bra006449 Brassica rapa Bra006449 I 0.000
Bra023669 Brassica rapa Bra023669 I 0.000
BRADI1G63630 Brachypodium distachyon BRADI1G63630 I 0.000
Cagra.0906s0022 Capsella grandiflora Cagra.0906s0022 I 0.000
Carubv10001373m.g Capsella rubella Carubv10001373m.g I 0.000
cassava25877.m1 Manihot esculenta cassava25877.m1 I 0.000
cassava35698.valid.m1 Manihot esculenta cassava35698.valid.m1 I 0.000
Ca_08255 Cicer arietinum Ca_08255 I 0.000
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I 0.000
Cla012339 Citrullus lanatus Cla012339 I 0.000
Cucsa.002980 Cucumis sativus Cucsa.002980 I 0.000
Eucgr.A02074 Eucalyptus grandis Eucgr.A02074 I 0.000
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I 0.000
F775_15511 Aegilops tauschii F775_15511 N 0.000
F775_29256 Aegilops tauschii F775_29256 I 0.000
ANAC087 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001462 I 0.000
gene20686-v1.0-hybrid Fragaria vesca gene20686-v1.0-hybrid I 0.000
GLYMA16G04720 Glycine max GLYMA16G04720 I 0.000
GLYMA19G28515 Glycine max GLYMA19G28515 I 0.000
Gorai.007G267700 Gossypium raimondii Gorai.007G267700 I 0.000
Gorai.013G118000 Gossypium raimondii Gorai.013G118000 I 0.000
GRMZM2G159500 Zea mays GRMZM2G159500 I 0.000
GRMZM2G181605 Zea mays GRMZM2G181605 N 0.000
GSMUA_Achr10G05070_001 Musa acuminata GSMUA_Achr10G05070_001 I 0.000
GSMUA_Achr3G09520_001 Musa acuminata GSMUA_Achr3G09520_001 I 0.000
GSMUA_Achr5G07600_001 Musa acuminata GSMUA_Achr5G07600_001 I 0.000
GSMUA_Achr6G08600_001 Musa acuminata GSMUA_Achr6G08600_001 I 0.000
GSMUA_Achr6G32290_001 Musa acuminata GSMUA_Achr6G32290_001 I 0.000
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I 0.000
GSMUA_Achr9G16920_001 Musa acuminata GSMUA_Achr9G16920_001 I 0.000
LPERR01G00270 Leersia perrieri LPERR01G00270 I 0.000
LPERR03G13930 Leersia perrieri LPERR03G13930 N 0.000
Lus10026879.g Linum usitatissimum Lus10026879.g I 0.000
MLOC_5832 Hordeum vulgare MLOC_5832 N 0.000
MLOC_64057 Hordeum vulgare MLOC_64057 N 0.000
MLOC_65400 Hordeum vulgare MLOC_65400 N 0.000
OBART03G15920 Oryza barthii OBART03G15920 N 0.000
OGLUM03G16080 Oryza glumaepatula OGLUM03G16080 N 0.000
OLONG_022063 Oryza longistaminata OLONG_022063 N 0.000
OMERI03G14250 Oryza meridionalis OMERI03G14250 N 0.000
ONIVA03G16900 Oryza nivara ONIVA03G16900 N 0.000
OPUNC03G15440 Oryza punctata OPUNC03G15440 N 0.000
ORGLA03G0152400 Oryza glaberrima ORGLA03G0152400 N 0.000
ORUFI03G16480 Oryza rufipogon ORUFI03G16480 N 0.000
OS03G0327100 Oryza sativa OS03G0327100 N 0.000
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I 0.000
Pavir.Bb02033 Panicum virgatum Pavir.Bb02033 I 0.000
Pavir.Eb00976 Panicum virgatum Pavir.Eb00976 I 0.000
Pavir.Ib01526 Panicum virgatum Pavir.Ib01526 I 0.000
Pavir.J13094 Panicum virgatum Pavir.J13094 I 0.000
POPTR_0019s04710 Populus trichocarpa POPTR_0019s04710 I 0.000
Sb01g036590 Sorghum bicolor Sb01g036590 I 0.000
Sb02g043270 Sorghum bicolor Sb02g043270 N 0.000
Si035639m.g Setaria italica Si035639m.g N 0.000
TCM_026028 Theobroma cacao TCM_026028 I 0.000
Thhalv10014060m.g Eutrema salsugineum Thhalv10014060m.g I 0.000
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I 0.000
Traes_2AS_7AAACC26B Triticum aestivum Traes_2AS_7AAACC26B N 0.000
Traes_2BS_00566A85C Triticum aestivum Traes_2BS_00566A85C N 0.000
Traes_4AS_B95A1C3A1 Triticum aestivum Traes_4AS_B95A1C3A1 I 0.000
Traes_4BL_B92B51F5D Triticum aestivum Traes_4BL_B92B51F5D I 0.000
Traes_4DL_D84567626 Triticum aestivum Traes_4DL_D84567626 I 0.000
Traes_5BL_420974D47 Triticum aestivum Traes_5BL_420974D47 N 0.000
TRIUR3_14541 Triticum urartu TRIUR3_14541 N 0.000
TRIUR3_20284 Triticum urartu TRIUR3_20284 N 0.000
TRIUR3_35152 Triticum urartu TRIUR3_35152 I 0.000