SINV10227 (Solenopsis invicta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SINV10227 T223259_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.833 0.964
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.822 0.964
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.822 0.964
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.822 0.964
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.813 0.929
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.813 0.929
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.813 0.929
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.813 0.929
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.813 0.929
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.813 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.813 0.911
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.813 0.911
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.813 0.911
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV10227-PA Homeodomain 16 74

Links

Other Homeodomain family TFs
Other Solenopsis invicta TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP26872 Atta cephalotes ACEP26872 N 0.000
Cflo_01956--FBpp0110265_DROME Camponotus floridanus Cflo_01956--FBpp0110265_DROME N 0.000
HSF5 Gallus gallus ENSGALG00000001031 I 0.000
GB53258 Apis mellifera GB53258 N 0.000
HMEL012381 Heliconius melpomene HMEL012381 N 0.000
ISCW007820 Ixodes scapularis ISCW007820 N 0.000
ISCW017545 Ixodes scapularis ISCW017545 N 0.000
MCINX007706 Melitaea cinxia MCINX007706 N 0.000
NV23059 Nasonia vitripennis NV23059 N 0.000
PHUM463900 Pediculus humanus PHUM463900 N 0.000
Sakowv30020529m.g Saccoglossus kowalevskii Sakowv30020529m.g N 0.000
SMAR015422 Strigamia maritima SMAR015422 N 0.000
SSTP_0000347500 Strongyloides stercoralis SSTP_0000347500 N 0.000