CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMAR002833
(
Strigamia maritima
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SMAR002833
T223364_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_07914
M02132_2.00
Fusarium graminearum
NNKACATGTHN
NDACATGTMNN
PBM
Weirauch et al.(2014)
pTH6329
0.649
0.391
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR002833-PA
Homeodomain
520
565
LKQWLIRHRQNPYPTKAEKISLALNSQMTLVQVNNWFANARRRLKN
Links
Other
Homeodomain
family TFs
Other
Strigamia maritima
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R003869
Calypte anna
Aan_R003869
I
0.705
Aan_R015659
Calypte anna
Aan_R015659
I
0.708
AARA003790
Anopheles arabiensis
AARA003790
I
0.637
AB04741.1
Alternaria brassicicola
AB04741.1
I
0.677
Afo_R009272
Aptenodytes forsteri
Afo_R009272
I
0.762
Afo_R011092
Aptenodytes forsteri
Afo_R011092
I
0.710
AGAP009986
Anopheles gambiae
AGAP009986
D
0.637
Alligator_sinensis_CCG010381.1
Alligator sinensis
Alligator_sinensis_CCG010381.1
I
0.762
AMAM020176
Anopheles maculatus
AMAM020176
I
0.637
Aqu1.225495
Amphimedon queenslandica
Aqu1.225495
I
0.692
A_07284
Schistosoma haematobium
A_07284
I
0.663
Brh_R000015
Buceros rhinoceros
Brh_R000015
I
0.728
Brh_R010356
Buceros rhinoceros
Brh_R010356
I
0.762
ATEG_05203
Aspergillus terreus
CADATEAG00005116
I
0.648
CapteG100741
Capitella teleta
CapteG100741
I
0.625
CapteG49895
Capitella teleta
CapteG49895
I
0.614
CapteG70907
Capitella teleta
CapteG70907
I
0.605
CapteG88319
Capitella teleta
CapteG88319
I
0.614
CCM_02544
Cordyceps militaris
CCM_02544
I
0.697
CGI_10011802
Crassostrea gigas
CGI_10011802
I
0.742
COCC4DRAFT_49159
Bipolaris maydis
COCC4DRAFT_49159
I
0.627
COCCADRAFT_44321
Bipolaris zeicola
COCCADRAFT_44321
I
0.627
COCMIDRAFT_53102
Bipolaris oryzae
COCMIDRAFT_53102
I
0.627
COCSADRAFT_107886
Bipolaris sorokiniana
COCSADRAFT_107886
I
0.619
COCVIDRAFT_49416
Bipolaris victoriae
COCVIDRAFT_49416
I
0.627
D915_00592
Fasciola hepatica
D915_00592
I
0.722
D915_04768
Fasciola hepatica
D915_04768
I
0.751
D915_05481
Fasciola hepatica
D915_05481
I
0.702
DICVIV_07073
Dictyocaulus viviparus
DICVIV_07073
N
0.613
DILT_0000254701
Diphyllobothrium latum
DILT_0000254701
I
0.707
DOTSEDRAFT_78718
Dothistroma septosporum
DOTSEDRAFT_78718
I
0.622
ECPE_0000388901
Echinostoma caproni
ECPE_0000388901
I
0.751
ENSAMXG00000000335
Astyanax mexicanus
ENSAMXG00000000335
I
0.698
ENSAPLG00000010674
Anas platyrhynchos
ENSAPLG00000010674
I
0.746
ENSCAFG00000010422
Canis familiaris
ENSCAFG00000010422
I
0.685
ENSCSAG00000011743
Chlorocebus sabaeus
ENSCSAG00000011743
I
0.762
IRX3
Dasypus novemcinctus
ENSDNOG00000012985
I
0.723
irx7
Gasterosteus aculeatus
ENSGACG00000011160
I
0.698
ENSMEUG00000004557
Macropus eugenii
ENSMEUG00000004557
I
0.723
ENSMPUG00000007638
Mustela putorius furo
ENSMPUG00000007638
I
0.685
ENSOANG00000029378
Ornithorhynchus anatinus
ENSOANG00000029378
I
0.685
ENSOARG00000016067
Ovis aries
ENSOARG00000016067
I
0.762
ENSONIG00000018672
Oreochromis niloticus
ENSONIG00000018672
I
0.815
MKX
Procavia capensis
ENSPCAG00000014719
I
0.762
ENSPFOG00000006638
Poecilia formosa
ENSPFOG00000006638
I
0.685
ENSPFOG00000013469
Poecilia formosa
ENSPFOG00000013469
I
0.815
ENSPTRG00000039451
Pan troglodytes
ENSPTRG00000039451
I
0.636
Irx3
Rattus norvegicus
ENSRNOG00000011533
I
0.685
ENSSSCG00000009724
Sus scrofa
ENSSSCG00000009724
I
0.636
MKX
Tupaia belangeri
ENSTBEG00000008150
I
0.762
mkxb
Tetraodon nigroviridis
ENSTNIG00000007881
I
0.815
mkxb
Takifugu rubripes
ENSTRUG00000004166
I
0.815
irx7
Takifugu rubripes
ENSTRUG00000007926
I
0.685
ENSXMAG00000006967
Xiphophorus maculatus
ENSXMAG00000006967
I
0.815
ENSXMAG00000012663
Xiphophorus maculatus
ENSXMAG00000012663
I
0.685
estExt_fgenesh2_pg.C_2210037
Branchiostoma floridae
estExt_fgenesh2_pg.C_2210037
I
0.771
estExt_Genewise1.C_110663
Cochliobolus heterostrophus C5
estExt_Genewise1.C_110663
I
0.627
FFUJ_12565
Fusarium fujikuroi
FFUJ_12565
I
0.622
FGRRES_07914
Fusarium graminearum
FGRRES_07914
D
0.649
FGRRES_17555
Fusarium graminearum
FGRRES_17555
I
0.656
FOXG_13545
Fusarium oxysporum
FOXG_13545
I
0.622
Gfo_R005354
Geospiza fortis
Gfo_R005354
I
0.704
Gfo_R014865
Geospiza fortis
Gfo_R014865
I
0.762
GPLIN_001377400
Globodera pallida
GPLIN_001377400
N
0.626
HCOI01137300
Haemonchus contortus
HCOI01137300
N
0.613
HelroG138488
Helobdella robusta
HelroG138488
I
0.722
HelroG153600
Helobdella robusta
HelroG153600
I
0.731
HelroG171177
Helobdella robusta
HelroG171177
I
0.704
HMEL002096
Heliconius melpomene
HMEL002096
I
0.756
HmN_000921700
Hymenolepis microstoma
HmN_000921700
I
0.693
HmN_000922600
Hymenolepis microstoma
HmN_000922600
I
0.693
HNAJ_0001179801
Hymenolepis nana
HNAJ_0001179801
I
0.693
ISCW017111
Ixodes scapularis
ISCW017111
I
0.815
L596_g21727
Steinernema carpocapsae
L596_g21727
I
0.701
L892_g27282
Steinernema scapterisci
L892_g27282
I
0.701
L893_g31416
Steinernema glaseri
L893_g31416
I
0.665
L898_g17064
Steinernema monticolum
L898_g17064
I
0.687
MCOS_0000604901
Mesocestoides corti
MCOS_0000604901
N
0.613
Myotis_brandtii_Irx1_10035798
Myotis brandtii
Myotis_brandtii_Irx1_10035798
I
0.685
NBR_0001052001
Nippostrongylus brasiliensis
NBR_0001052001
N
0.613
Ocbimv22006483m.g
Octopus bimaculoides
Ocbimv22006483m.g
I
0.742
Ogr18478
Ophisaurus gracilis
Ogr18478
I
0.685
PTT_11733
Pyrenophora teres
PTT_11733
I
0.677
PXEA_0002454601
Protopolystoma xenopodis
PXEA_0002454601
I
0.724
SCUD_0000714801
Schistosoma curassoni
SCUD_0000714801
I
0.663
SETTUDRAFT_162538
Setosphaeria turcica
SETTUDRAFT_162538
I
0.628
Sjc_0052220
Schistosoma japonicum
Sjc_0052220
I
0.663
SMAR007687
Strigamia maritima
SMAR007687
I
0.685
SMRZ_0000148301
Schistosoma margrebowiei
SMRZ_0000148301
I
0.663
SMTD_0002243001
Schistosoma mattheei
SMTD_0002243001
I
0.685
SMUV_0000063001
Syphacia muris
SMUV_0000063001
I
0.746
SNOG_06363
Phaeosphaeria nodorum
SNOG_06363
I
0.645
SNOG_06363
Stagonospora nodorum
SNOG_06363
I
0.645
SPER_0001325101
Spirometra erinaceieuropaei
SPER_0001325101
I
0.650
SSLN_0000846501
Schistocephalus solidus
SSLN_0000846501
I
0.650
Tal_R007088
Tyto alba
Tal_R007088
I
0.762
TASK_0000658901
Taenia asiatica
TASK_0000658901
I
0.738
TsM_000760900
Taenia solium
TsM_000760900
I
0.692
TTAC_0000670801
Hydatigera taeniaeformis
TTAC_0000670801
I
0.692
Z519_11142
Cladophialophora bantiana
Z519_11142
I
0.649