VHEMI01080 (Torrubiella hemipterigena)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VHEMI01080 T224492_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU09556
M02226_2.00 		Neurospora crassa
TTAATWTA
TAWATTAA		 PBM
Weirauch et al.(2014)
pTH8955 		0.850 0.930
Q0UJ27_PHANO_CONSTRUCT
M02202_2.00 		PBM CONSTRUCTS
NYAATHWNN
NNWDATTRN		 PBM
Weirauch et al.(2014)
pTH6773 		0.776 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CEJ80923 Homeodomain 212 269

Links

Other Homeodomain family TFs
Other Torrubiella hemipterigena TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29638.m000522 Ricinus communis 29638.m000522 N
AMTR_s00009p00103030 Amborella trichopoda AMTR_s00009p00103030 N
TRFL3 Arabidopsis thaliana AT1G17460 N
TRFL6 Arabidopsis thaliana AT1G72650 N
BGIOSGA009134 Oryza indica BGIOSGA009134 N
Bo5g023810 Brassica oleracea Bo5g023810 N
Bo6g091360 Brassica oleracea Bo6g091360 N
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N
Bostr.7128s0357 Boechera stricta Bostr.7128s0357 N
Bra003870 Brassica rapa Bra003870 N
Bra003871 Brassica rapa Bra003871 N
Bra016044 Brassica rapa Bra016044 N
Bra025973 Brassica rapa Bra025973 N
BRADI3G57300 Brachypodium distachyon BRADI3G57300 N
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N
Cagra.1013s0036 Capsella grandiflora Cagra.1013s0036 N
Carubv10019876m.g Capsella rubella Carubv10019876m.g N
Ciclev10025094m.g Citrus clementina Ciclev10025094m.g N
Cla015802 Citrullus lanatus Cla015802 N
Cucsa.360310 Cucumis sativus Cucsa.360310 N
F775_05862 Aegilops tauschii F775_05862 N
TRFL3 Arabidopsis lyrata fgenesh2_kg.1__1907__AT1G17460.1 N
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N
gene07405-v1.0-hybrid Fragaria vesca gene07405-v1.0-hybrid N
Gorai.011G058300 Gossypium raimondii Gorai.011G058300 N
GRMZM2G049194 Zea mays GRMZM2G049194 N
GSMUA_Achr5G24660_001 Musa acuminata GSMUA_Achr5G24660_001 N
LPERR02G28410 Leersia perrieri LPERR02G28410 N
Lus10015664.g Linum usitatissimum Lus10015664.g N
Lus10037678.g Linum usitatissimum Lus10037678.g N
MDP0000261067 Malus domestica MDP0000261067 N
MDP0000279204 Malus domestica MDP0000279204 N
mgf013194m Mimulus guttatus mgf013194m N
MLOC_56874 Hordeum vulgare MLOC_56874 N
OB02G41350 Oryza brachyantha OB02G41350 N
OBART02G34530 Oryza barthii OBART02G34530 N
OGLUM02G35670 Oryza glumaepatula OGLUM02G35670 N
ONIVA02G36570 Oryza nivara ONIVA02G36570 N
orange1.1g006062m.g Citrus sinensis orange1.1g006062m.g N
ORGLA02G0298600 Oryza glaberrima ORGLA02G0298600 N
ORUFI02G36040 Oryza rufipogon ORUFI02G36040 N
OS02G0776700 Oryza sativa OS02G0776700 N
Pavir.Aa00316 Panicum virgatum Pavir.Aa00316 N
Pavir.J06110 Panicum virgatum Pavir.J06110 N
PDK_20s1327961g002 Phoenix dactylifera PDK_20s1327961g002 N
PK02666.1 Cannabis sativa PK02666.1 N
Pm013286 Prunus mume Pm013286 N
PRUPE_ppa003052mg Prunus persica PRUPE_ppa003052mg N
Sb04g034770 Sorghum bicolor Sb04g034770 N
Si016649m.g Setaria italica Si016649m.g N
Solyc03g121990.2 Solanum lycopersicum Solyc03g121990.2 N
TCM_029115 Theobroma cacao TCM_029115 N
Thhalv10007199m.g Eutrema salsugineum Thhalv10007199m.g N
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N
TRAES3BF079700090CFD_g Triticum aestivum TRAES3BF079700090CFD_g N
Traes_3AL_B71F3F028 Triticum aestivum Traes_3AL_B71F3F028 N
Traes_3DL_A631E1F0C Triticum aestivum Traes_3DL_A631E1F0C N
TRIUR3_15439 Triticum urartu TRIUR3_15439 N