Afo_R009187 (Aptenodytes forsteri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Afo_R009187 T225113_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.821 0.909
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.777 0.873
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.776 0.873
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.776 0.873
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.776 0.873
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.776 0.873
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.776 0.873
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.776 0.873
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.768 0.836
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.768 0.836
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.768 0.836
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.768 0.836
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.768 0.836
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.768 0.836
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R009187 Homeodomain 1 58

Links

Other Homeodomain family TFs
Other Aptenodytes forsteri TFs

390 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE000335 Anopheles atroparvus AATE000335 I 0.000
ACAC_0000050701 Angiostrongylus cantonensis ACAC_0000050701 I 0.000
ACEP14857 Atta cephalotes ACEP14857 I 0.000
ACOC_0000924001 Angiostrongylus costaricensis ACOC_0000924001 I 0.000
ACYPI31510 Acyrthosiphon pisum ACYPI31510 I 0.000
ACYPI31512 Acyrthosiphon pisum ACYPI31512 I 0.000
AMAM003778 Anopheles maculatus AMAM003778 I 0.000
ANCCEY_04739 Ancylostoma ceylanicum ANCCEY_04739 I 0.000
ANCDUO_13968 Ancylostoma duodenale ANCDUO_13968 I 0.000
ASU_06642 Ascaris suum ASU_06642 I 0.000
BXY_0842900 Bursaphelenchus xylophilus BXY_0842900 I 0.000
CapteG130298 Capitella teleta CapteG130298 I 0.000
CBG03854 Caenorhabditis briggsae CBG03854 I 0.000
CBN09920 Caenorhabditis brenneri CBN09920 I 0.000
CBN18838 Caenorhabditis brenneri CBN18838 I 0.000
CJA03417 Caenorhabditis japonica CJA03417 I 0.000
Cmyd_10014184 Chelonia mydas Cmyd_10014184 I 0.000
CRE08084 Caenorhabditis remanei CRE08084 I 0.000
DICVIV_01967 Dictyocaulus viviparus DICVIV_01967 I 0.000
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I 0.000
ENSBTAG00000003540 Bos taurus ENSBTAG00000003540 I 0.000
ST18 Homo sapiens ENSG00000147488 I 0.000
MYT1L Homo sapiens ENSG00000186487 I 0.000
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I 0.000
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.000
ENSTGUG00000014218 Taeniopygia guttata ENSTGUG00000014218 I 0.000
EVEC_0001307101 Enterobius vermicularis EVEC_0001307101 I 0.000
e_gw.598.24.1 Branchiostoma floridae e_gw.598.24.1 I 0.000
GI16394 Drosophila mojavensis FBgn0139142 I 0.000
GL14771 Drosophila persimilis FBgn0152375 I 0.000
CG43689 Drosophila melanogaster FBgn0263772 I 0.000
Hba_17025 Heterorhabditis bacteriophora Hba_17025 I 0.000
HelroG85268 Helobdella robusta HelroG85268 I 0.000
HHAL001110-PA Halyomorpha halys HHAL001110-PA I 0.000
ISCW018799 Ixodes scapularis ISCW018799 I 0.000
L596_g1281 Steinernema carpocapsae L596_g1281 I 0.000
L889_g28085 Steinernema feltiae L889_g28085 I 0.000
L893_g1446 Steinernema glaseri L893_g1446 I 0.000
LCUP002242 Lucilia cuprina LCUP002242 I 0.000
Minc05804 Meloidogyne incognita Minc05804 I 0.000
NBR_0001165301 Nippostrongylus brasiliensis NBR_0001165301 I 0.000
nDi.2.2.2.g06992 Dirofilaria immitis nDi.2.2.2.g06992 I 0.000
NECAME_10938 Necator americanus NECAME_10938 I 0.000
nLs.2.1.2.g09672 Litomosoides sigmodontis nLs.2.1.2.g09672 I 0.000
nRc.2.0.1.g21954 Romanomermis culicivorax nRc.2.0.1.g21954 N 0.000
Ocbimv22028295m.g Octopus bimaculoides Ocbimv22028295m.g I 0.000
OESDEN_24201 Oesophagostomum dentatum OESDEN_24201 I 0.000
PTRK_0001788400 Parastrongyloides trichosuri PTRK_0001788400 I 0.000
RSKR_0000214800 Rhabditophanes kr3021 RSKR_0000214800 I 0.000
Smp_168610 Schistosoma mansoni Smp_168610 N 0.000
SMU15028607 Schmidtea mediterranea SMU15028607 I 0.000
SMUV_0000666101 Syphacia muris SMUV_0000666101 I 0.000
SPAL_0000489100 Strongyloides papillosus SPAL_0000489100 I 0.000
SPAL_0000892700 Strongyloides papillosus SPAL_0000892700 I 0.000
SSTP_0000574400 Strongyloides stercoralis SSTP_0000574400 I 0.000
SVE_1935100 Strongyloides venezuelensis SVE_1935100 I 0.000
SVE_1952800 Strongyloides venezuelensis SVE_1952800 I 0.000
TELCIR_22038 Teladorsagia circumcincta TELCIR_22038 I 0.000
TELCIR_26151 Teladorsagia circumcincta TELCIR_26151 I 0.000
ztf-11 Caenorhabditis elegans WBGene00009939 D 0.000
WBGene00238210 Onchocerca volvulus WBGene00238210 I 0.000
YQE_11977 Dendroctonus ponderosae YQE_11977 I 0.000