ENSBTAP00000006356-D1 (Bos grunniens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ENSBTAP00000006356-D1 T225832_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000006356-D1 Homeodomain 99 158

Links

Other Homeodomain family TFs
Other Bos grunniens TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000629 Calypte anna Aan_R000629 I 0.000
Afo_R001077 Aptenodytes forsteri Afo_R001077 I 0.000
Alligator_sinensis_CCG021387.1 Alligator sinensis Alligator_sinensis_CCG021387.1 I 0.000
Brh_R003731 Buceros rhinoceros Brh_R003731 I 0.000
Cmyd_10020309 Chelonia mydas Cmyd_10020309 I 0.000
JUN Anolis carolinensis ENSACAG00000007057 I 0.000
ENSAMEG00000000275 Ailuropoda melanoleuca ENSAMEG00000000275 I 0.000
ENSAMXG00000025987 Astyanax mexicanus ENSAMXG00000025987 I 0.000
ENSAPLG00000005928 Anas platyrhynchos ENSAPLG00000005928 I 0.000
JUN Bos taurus ENSBTAG00000004037 I 0.000
JUN Canis familiaris ENSCAFG00000018897 I 0.000
JUN Cavia porcellus ENSCPOG00000026377 I 0.000
ENSCSAG00000000149 Chlorocebus sabaeus ENSCSAG00000000149 I 0.000
jun Danio rerio ENSDARG00000043531 I 0.000
JUN Dasypus novemcinctus ENSDNOG00000046358 I 0.000
ENSECAG00000024055 Equus caballus ENSECAG00000024055 I 0.000
JUN Echinops telfairi ENSETEG00000010613 I 0.000
ENSFALG00000015113 Ficedula albicollis ENSFALG00000015113 I 0.000
JUN Felis catus ENSFCAG00000024972 I 0.000
JUN Homo sapiens ENSG00000177606 D 0.000
JUN Gallus gallus ENSGALG00000010870 I 0.000
JUN Gorilla gorilla ENSGGOG00000003233 I 0.000
ENSGMOG00000019642 Gadus morhua ENSGMOG00000019642 I 0.000
ENSLACG00000004975 Latimeria chalumnae ENSLACG00000004975 I 0.000
JUN Loxodonta africana ENSLAFG00000012900 I 0.000
ENSLOCG00000017745 Lepisosteus oculatus ENSLOCG00000017745 I 0.000
JUN Meleagris gallopavo ENSMGAG00000011531 I 0.000
ENSMLUG00000022840 Myotis lucifugus ENSMLUG00000022840 I 0.000
ENSMMUG00000032072 Macaca mulatta ENSMMUG00000032072 I 0.000
JUN Monodelphis domestica ENSMODG00000003321 I 0.000
ENSMPUG00000020182 Mustela putorius furo ENSMPUG00000020182 I 0.000
Jun Mus musculus ENSMUSG00000052684 D 0.000
ENSOARG00000009999 Ovis aries ENSOARG00000009999 I 0.000
JUN Oryctolagus cuniculus ENSOCUG00000001212 I 0.000
JUN Otolemur garnettii ENSOGAG00000005602 I 0.000
ENSONIG00000020823 Oreochromis niloticus ENSONIG00000020823 I 0.000
jun Oryzias latipes ENSORLG00000014541 I 0.000
ENSP00000360266 Macaca fascicularis ENSP00000360266 I 0.000
ENSP00000360266-D1 Bos grunniens ENSP00000360266-D1 I 0.000
ENSPANG00000012317 Papio anubis ENSPANG00000012317 I 0.000
ENSPFOG00000020898 Poecilia formosa ENSPFOG00000020898 I 0.000
ENSPPYG00000001295 Pongo abelii ENSPPYG00000001295 I 0.000
ENSPSIG00000000515 Pelodiscus sinensis ENSPSIG00000000515 I 0.000
JUN Pan troglodytes ENSPTRG00000039670 I 0.000
JUN Pteropus vampyrus ENSPVAG00000012803 I 0.000
Jun Rattus norvegicus ENSRNOG00000026293 I 0.000
ENSSSCG00000030839 Sus scrofa ENSSSCG00000030839 I 0.000
ENSSTOG00000028549 Ictidomys tridecemlineatus ENSSTOG00000028549 I 0.000
ENSTBEG00000015475 Tupaia belangeri ENSTBEG00000015475 I 0.000
JUN Taeniopygia guttata ENSTGUG00000009693 I 0.000
JUN Tursiops truncatus ENSTTRG00000011529 I 0.000
ENSXMAG00000019940 Xiphophorus maculatus ENSXMAG00000019940 I 0.000
Gfo_R010199 Geospiza fortis Gfo_R010199 I 0.000
Myotis_brandtii_Jun_10020944 Myotis brandtii Myotis_brandtii_Jun_10020944 I 0.000
Ogr14876 Ophisaurus gracilis Ogr14876 I 0.000
Pvit_08017 Pogona vitticeps Pvit_08017 I 0.000
Tal_R003549 Tyto alba Tal_R003549 I 0.000
jun.L Xenopus laevis XB-GENE-864843 I 0.000
XP_002931634 Xenopus tropicalis XP_002931634 I 0.000