estExt_Genewise1.C_11468 (Cochliobolus heterostrophus C5)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_Genewise1.C_11468 T227420_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATEG_04171
M02059_2.00 		Aspergillus terreus
BWWATKRNNN
NNNYMATWWV		 PBM
Weirauch et al.(2014)
pTH5871 		0.787 0.737
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.638 0.526
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.638 0.526
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.638 0.526
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.638 0.526
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.611 0.456
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.611 0.456
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.611 0.456
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.611 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_11468 Homeodomain 55 111

Links

Other Homeodomain family TFs
Other Cochliobolus heterostrophus C5 TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30068.m002619 Ricinus communis 30068.m002619 I 0.000
Aquca_020_00034 Aquilegia coerulea Aquca_020_00034 I 0.000
NAC014 Arabidopsis thaliana AT1G33060 I 0.000
NTL9 Arabidopsis thaliana AT4G35580 D 0.000
Bo5g086780 Brassica oleracea Bo5g086780 I 0.000
Bostr.3359s0059 Boechera stricta Bostr.3359s0059 I 0.000
Bostr.7867s1416 Boechera stricta Bostr.7867s1416 I 0.000
Bra010193 Brassica rapa Bra010193 I 0.000
Cagra.1443s0001 Capsella grandiflora Cagra.1443s0001 I 0.000
Cagra.2350s0100 Capsella grandiflora Cagra.2350s0100 I 0.000
Carubv10007613m.g Capsella rubella Carubv10007613m.g I 0.000
Carubv10008529m.g Capsella rubella Carubv10008529m.g I 0.000
Ciclev10019282m.g Citrus clementina Ciclev10019282m.g I 0.000
Eucgr.E01095 Eucalyptus grandis Eucgr.E01095 I 0.000
evm.TU.supercontig_37.112 Carica papaya evm.TU.supercontig_37.112 I 0.000
ANAC014 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002639 I 0.000
NTL9 Arabidopsis lyrata fgenesh2_kg.7__521__AT4G35580.1 I 0.000
gene01851-v1.0-hybrid Fragaria vesca gene01851-v1.0-hybrid I 0.000
Gorai.008G261400 Gossypium raimondii Gorai.008G261400 I 0.000
Lus10008285.g Linum usitatissimum Lus10008285.g I 0.000
Lus10010148.g Linum usitatissimum Lus10010148.g I 0.000
Lus10033251.g Linum usitatissimum Lus10033251.g I 0.000
MDP0000266908 Malus domestica MDP0000266908 I 0.000
MDP0000658409 Malus domestica MDP0000658409 I 0.000
mgf022344m Mimulus guttatus mgf022344m I 0.000
orange1.1g009388m.g Citrus sinensis orange1.1g009388m.g I 0.000
PK02019.1 Cannabis sativa PK02019.1 I 0.000
Pm029581 Prunus mume Pm029581 I 0.000
POPTR_0001s45700 Populus trichocarpa POPTR_0001s45700 I 0.000
POPTR_0011s15230 Populus trichocarpa POPTR_0011s15230 I 0.000
PRUPE_ppa001291mg Prunus persica PRUPE_ppa001291mg I 0.000
SapurV1A.0285s0090 Salix purpurea SapurV1A.0285s0090 I 0.000
TCM_015584 Theobroma cacao TCM_015584 I 0.000
Thhalv10007021m.g Eutrema salsugineum Thhalv10007021m.g I 0.000
VIT_02s0025g03020 Vitis vinifera VIT_02s0025g03020 I 0.000