Bostr.3877s0047 (Boechera stricta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Bostr.3877s0047 T228151_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT6
M02037_2.00 		Arabidopsis thaliana
NNWGACNNNN
NNNNGTCWNN		 PBM
Weirauch et al.(2014)
pTH7296 		0.818 0.821
KNOX3_HORVU
M10790_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$KNOX3_01 		0.814 0.929
GRMZM2G135447
M02139_2.00 		Zea mays
DTGACRKS
SMYGTCAH		 PBM
Weirauch et al.(2014)
pTH6328 		0.803 0.911
GRMZM2G087741
M02138_2.00 		Zea mays
NNTGACRKCN
NGMYGTCANN		 PBM
Weirauch et al.(2014)
pTH5816 		0.795 0.750
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.741 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.3877s0047.1.p Homeodomain 299 357

Links

Other Homeodomain family TFs
Other Boechera stricta TFs

323 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BDDG_05885 Blastomyces dermatitidis BDDG_05885 I
CADAFLAG00011240 Aspergillus flavus CADAFLAG00011240 N
EPUS_05070 Endocarpon pusillum EPUS_05070 N
GLRG_11296 Colletotrichum graminicola GLRG_11296 N
PAAG_11662 Paracoccidioides sp lutzii PAAG_11662 I
PABG_12465 Paracoccidioides brasiliensis PABG_12465 I
PVAR5_3492 Byssochlamys spectabilis PVAR5_3492 N
TSTA_050470 Talaromyces stipitatus TSTA_050470 I
XP_001539264.1 Histoplasma capsulatum XP_001539264.1 D